KEGG   Dictyostelium discoideum (cellular slime mold): DDB_G0272771
Entry
DDB_G0272771      CDS       T00245                                 
Symbol
wdr7
Name
(RefSeq) WD40 repeat-containing protein
  KO
K24738  rabconnectin-3b
Organism
ddi  Dictyostelium discoideum (cellular slime mold)
Pathway
ddi04142  Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:ddi00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome biogenesis
    DDB_G0272771 (wdr7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ddi04131]
    DDB_G0272771 (wdr7)
Membrane trafficking [BR:ddi04131]
 Endosome - Lysosome transport
  Acidification regulators
   Rabconnectin-3 complex
    DDB_G0272771 (wdr7)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_IFT122_1st WD40_Prp19 Beta-prop_THOC3 WD40_WDHD1_1st WD40 WD40_CDC20-Fz Beta-prop_WDR36-Utp21_2nd Beta-prop_EML_2 Beta-prop_WDR3_2nd WDR55 Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_2nd WD40_Gbeta Beta-prop_TEP1_2nd ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_NOL10_N EIF3I TOR1L1_N Beta-prop_HPS5 Beta-prop_ACSF4 DUF7051 Beta-prop_LRRK2 Beta-prop_CAF1B_HIR1 WD40_2 Beta-prop_WDR75_1st
Other DBs
NCBI-GeneID: 8618637
NCBI-ProteinID: XP_644959
dictyBase: DDB_G0272771
UniProt: Q86L37
LinkDB
Position
2:complement(<2154360..>2158488)
AA seq 1342 aa
MSFNLNSSSGSVLNGSGVYNNSNGTYSNGPSPLSVSGGSSSSGMNGSNALLSNSLQSVNG
NNSSNYILNKGTEILVPVVLWCGSPSHWITSIIITPDKKTIISGSQSGHIAITSISLDQG
KENQFTPKILGIGHENPITCLALGEFERKEVVISAASDGSMSVWSIMDGLCLLSTVSHFL
SCSPTQMVSLPNRKQVAVCGKGSNYIYIVDIHSLRIVSTINDHMDWVTSLFSCTMQDSTS
MLLSGGLDGIIRFWLLKPGDQDMALQVIDSRNVNGGGSGVDGSYTLDDAPISIKFSPNGK
SLLVVTKNNWSIFTTQNSRLLYSIRCPCTTIQEKQAGLPTSGGWFGGSFIDNSMVLIWNK
EGRGFLYRIDQTDLKSFPLGDPVPIEGTSPLLSRSYGSSLSSSSNLNNSSFNINNSNSNN
NNNNSNGKIGQPDYSIINFTYQSGIPPPQLLITFTSNDNNNSQQTPLLKIGAAMCFGNIF
MIGDVYGHIRIWVIPVNSEQLLNPTNQTATTSGKRILREPNLQGSISDGWKSVEQSGKGG
KARQQRVTASLLLDDTMMLIRGYEDGSISTSKLPTDLFTKFYNNSHNSRVNYLMSSPPGT
GLRRLLFSASNDCTIKVWDLSTFKLLHTFSHHTGPVYSIFSLPQSSRRNTFISISEDKTI
GMYSMEDLSCKHMFGVHSSSISKVHWKNEQGYLMVETIDGSVSIWEMGSGELEGVVYGQI
AKDILDNSELLSNNWKQQESKIHSGQHFPTKSLVYTHKNDPPIQTLFLNIKSISEDILLI
TQQKQQQQQQQSQQQQQQQPQSQSQQQQQQQVQQQQQQNIGSSIIQKDLNQLVSIFSYLI
PWGMDKALDILYMKDFQLRPPQPDFSFGLLGHGGNMSFLTPSVSFSTGKLQCSETLTAQT
TLSAVALGRTILRIGGMENTVSQLTTYYCTTLPETLQGYVYPDFSYLATYCQDGNEDVMI
SARSIFKISIERMPNTAFKQLVNSFCSVLNADCLGPFERARSIIVLAIIASNRPNSDFNN
AFSSRVGIELQKMIYKGTGNLTIIAVELIGKGFSIWKDSIKDLPGLLKCLFTLTMQSDPL
ATTSKTSLLLIGSVDPKTFIQVIGDEISSENTSTTCRVHGIVLIGSLIKKDPDSVLPFLP
RVIDSIIKSLDPHTPVLREACIRQTTAVLHLMVNKYPMVSFHHDTQRLVLGTLDGLVVIY
DLKTATRWHRFESFKNSFVSAVTFNESGKMLACYCSLSNEIKIWQASSTFFGLINSSQFT
CVRTVSTASEKQTSLGFNSPPTQPLNQNQNNNNNLKQQQSIINNSQPTIPKIENIKLFWS
NQNSLVLTKDDTNTITFNIPSN
NT seq 4029 nt   +upstreamnt  +downstreamnt
atgagttttaatttaaactcaagtagtgggtcagtattaaatggtagtggagtatataat
aatagtaatggaacatattcaaatggaccatcaccattatcagtgagtggtggtagtagt
agtagtggaatgaatggtagcaatgcattactatccaatagtttacaatcagttaatggt
aataatagtagtaattatatattaaataaaggtacagaaatactggtaccagttgttctt
tggtgtggttcaccatcacattggataacatcaatcatcattactccagataaaaaaaca
atcatatcaggttcacaatctggtcacattgcaataacttcaatttcattagatcaagga
aaagaaaatcaatttacaccgaaaattttaggtattggacatgagaatccaattacatgt
ttagcattaggagaatttgaaagaaaggaagttgttattagtgcagcatcagatggtagt
atgtcagtgtggagtataatggatggattatgtttattgtcgacagtatcacattttcta
tcatgttcaccaacacagatggtatcattacccaataggaaacaggtagctgtatgtggt
aaaggttcaaactatatatatattgtcgatattcattcattgcgaatcgtaagtacgatc
aatgatcacatggattgggtgacaagtttattctcttgtacgatgcaagattcgacctcg
atgctattatcgggtgggttggatggtattattagattttggttactcaaacccggtgat
caagatatggcattgcaagttatagattctagaaatgttaatggtggaggtagtggtgtc
gatggtagttacacattggatgacgcacccatctcaattaaattctcacccaatggtaaa
tcgttattggttgtgacaaagaacaattggtccattttcaccacccaaaattcaagatta
ctctattcaattcgttgtccttgtacaaccattcaagagaaacaagcaggtttgccaact
agtggtggttggtttggtggttcgttcattgataatagtatggttttaatttggaataaa
gaaggcagaggtttcctttatcgtatcgatcaaaccgatttaaaatctttccctttaggt
gaccctgtaccaattgaaggtacctcaccattattatcaagatcatatggttcatctcta
tcctcctcttcaaatttaaataatagttcttttaatattaataatagcaatagcaataat
aataataataatagtaatggtaaaattggtcaaccagattattcaataattaatttcact
tatcaatcaggtataccaccaccacaattgttaataacttttacttcaaatgataataat
aatagtcaacaaacaccattattaaaaattggagcagcaatgtgttttggtaatatattt
atgattggtgatgtttatggtcatattagaatttgggtaataccagttaatagtgaacaa
ttgttaaatccaactaatcagacagcaacaactagtggtaagagaatattaagagaacca
aatttacaaggatcaatatctgatggttggaagagtgttgaacagagtggtaaaggtggc
aaagcaagacaacaacgtgttacagcctcacttttattggatgatacgatgatgttgata
cgtggttacgaggatggcagtattagtaccagtaaattacccaccgatttatttacgaaa
ttttataacaactctcataatagtagggtaaactatttgatgagttcaccacctggcact
ggtctaagacgattgttattctctgcatccaatgattgcacaattaaagtttgggattta
agtacattcaaattgttacacactttctctcatcatacaggtcccgtgtattcaatattc
tcgttaccacaatcgtcaagaagaaataccttcatatccatctctgaagataaaacaatc
ggtatgtactctatggaggatctatcatgtaaacacatgtttggtgttcactcttcatca
atatccaaggtacattggaagaatgaacaaggttatctaatggttgaaactatcgatggt
tcagtttcaatttgggagatgggaagtggagaacttgaaggtgtagtatatggtcaaatc
gctaaggatatcttggataattcagaattactctcgaataattggaaacaacaagaaagt
aaaattcattcaggtcaacattttccaactaaatctttagtttatactcataaaaatgat
ccaccaattcaaactttatttttaaatataaaatcaatttctgaagatattttattaata
actcaacaaaaacaacaacaacaacaacaacaatcacaacaacaacaacaacaacaacca
caatcacaatcacaacaacaacaacaacaacaagtacaacaacaacaacaacaaaatatt
ggatcatcaataattcaaaaagatttaaatcaattagtatcaatattttcatatttaata
ccatggggtatggataaagcattagatatattatatatgaaagattttcaattaagacca
ccacaaccagatttttcatttggtttattaggtcatggtggtaatatgagtttccttaca
ccaagtgtatcattttcaacaggtaaattacaatgttcagaaactttaacagctcaaaca
actttatcagcggtagcattgggtagaactatacttagaattggtggtatggagaatacc
gtcagccagttaacgacatactattgtacaacattaccagagaccctacaagggtatgtt
tatccagatttctcttatttagcaacttattgtcaagatggtaatgaagatgttatgatt
agtgctcgttcaatatttaagatttcaattgaacgtatgccaaatactgcattcaaacag
ttggtaaattcattctgtagtgtattgaatgccgattgtttgggtccatttgaaagagca
cgttcaatcattgttttggcaatcattgcatccaatagaccaaattcagattttaacaat
gccttctcttcacgtgttggtattgaacttcaaaagatgatctataaaggtacaggtaat
ttaacgattatagcggtggaattgattggtaaaggattctccatttggaaagactcaatt
aaagatttaccaggtctattgaaatgtttattcacacttacaatgcaatcggatccattg
gctacaacctcaaaaacttcattgcttttaattggttccgtagatcctaaaacttttatt
caagtaattggcgatgaaatatcaagtgaaaatactagtaccacttgtagagttcatggt
attgtactcattgggtctttgataaagaaagatcccgattcagttttacctttcctacca
cgtgttatcgattcaatcatcaaaagcttagatcctcatacaccagttttacgtgaggct
tgtatacgtcaaaccactgctgtcttacatttaatggtcaataaatatccaatggttagt
tttcatcatgatactcaacgtttggtattaggtactttggatggtttagtcgtaatctat
gatttgaaaactgctactagatggcatcgtttcgaatcatttaaaaattcatttgtctct
gctgtcacctttaatgaaagtggtaagatgttggcttgctattgttcactctcaaatgaa
attaaaatttggcaagcaagttcaacattttttggtttaattaattcaagtcaattcact
tgtgttcgtacagtttcaaccgcttctgaaaaacaaacttctcttggttttaattcacca
ccaactcaacctttaaatcaaaatcaaaataataataataacttaaaacaacaacaatct
ataattaataattctcaaccaacaataccaaaaattgaaaatattaaattattttggtca
aatcaaaattcattggttttaactaaagatgatacaaatactataacttttaatattcct
tcaaattaa

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