Dictyostelium discoideum (cellular slime mold): DDB_G0272985
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Entry
DDB_G0272985 CDS
T00245
Symbol
vps54
Name
(RefSeq) vacuolar protein sorting 54 family protein
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ddi01009
]
DDB_G0272985 (vps54)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ddi04131
]
DDB_G0272985 (vps54)
Protein phosphatases and associated proteins [BR:
ddi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
DDB_G0272985 (vps54)
Membrane trafficking [BR:
ddi04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
DDB_G0272985 (vps54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54
Vps54_N
COG4_N
Sigma70_ner
Motif
Other DBs
NCBI-GeneID:
8618590
NCBI-ProteinID:
XP_644911
dictyBase:
DDB_G0272985
UniProt:
Q559A5
LinkDB
All DBs
Position
2:2012543..2015571
Genome browser
AA seq
984 aa
AA seq
DB search
MSLNNYNNNNNNNRNNNNNNNNSNNNNNSFTNDNYAIDTEWENNKNNNNVTSPISSNHSS
PSSSSLSRSSSMLFGENNGTSPFIFAQSLTSVCLDPMSPLPNEWSPSDLQLPQSSSSSSS
SATTATTTNGNNVITSPTLQFNNSSNINIQSFNSYIQKIKPYYKIFLENKQKDLIPTNKK
TKEEIISLENIPAFFFKKDMTVNEILNYANNDPSPIIFQKLEHYYTIIEENIVGHVRDKS
LLFFSAMSDLKQFRSQLINLSNHIKNSEETLGEIDDNIIHGLNISKLFLQKNRIKDTLET
LSLVSEVTQAQPALQLLLSKGDYMGALELINRTQSAISLELHYISSLKNLSPQLLEMINL
IEKMSLQDFIKYSLNDEILLSSSPNSNNNSPIFNKLSLKNRNRNKINSSNNEEKEDNEDY
YDEEDDDDDDDDENINYESLNENLNNYLSPLIIVLLKVGRIQEALEEFRDASNESFKQLF
KNTVANITYQLLDSGGSSHHKTPTNSFNSQNFNWNDCKLKLLKLSSNDSLPLFKAVEKAF
RRKFIVFSKVLELIIDIVNNNNGINNNGINNNNNKNGDKSPNIFGETVINTCSTVAYSII
ETMQERISSLMKVRGEINAKLALPDFVLLYNQIESFLKFTESYSLSKRKTPILRSSILAQ
LKMFLDILHQNRLSSLKLLLENEDWVQVKVVSEFQNIVNSIVQQSTDYNNKDNNKDNNNN
NNNNENNNISDEIYINSEPFKVVNTSLMLLKFINDYLCCCEKLPTIIIDSLPKIIEILNT
FNSMTHQLVLMAGARQTMKLKTITSKHLGYASQSLSFQIKLIPYIKVIVSRSLTVKQLSL
LNGLDKLLQDFVSHRQEIFNKFVVIIKERSSYHLKVLGSIDLRDDTLPIPTPPIASLSKD
ITTLHKLLASILPPDQLFKVFTNIYFMFNSLFIENLSKFDMSHKLSKRRIHNDVLHLLNS
IRNLPNAGDPGNDIEDYLNQHFPM
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atgtctttaaataattacaacaacaacaacaacaacaaccgcaacaataacaacaacaac
aataatagtaataataataataatagttttacgaatgataactatgcaattgatacagaa
tgggaaaataataaaaataataataatgtaacatcaccaatatcatcaaatcatagttca
ccatcttcgtcatcattatcaagatcatcatctatgttatttggagagaacaatggcaca
tcaccatttatatttgctcaatcattaacatcggtttgtttagatccaatgtcaccatta
ccaaatgaatggtcaccctcagatttacaattaccacaatcatcatcctcttcatcctct
tcagcgacaacagcgacaacaacaaatgggaataatgttataacatcaccaacattacaa
tttaataatagtagtaatattaatattcaatcatttaatagctatattcaaaagattaag
ccatattataagatattcttagagaataaacaaaaggatttaataccaacaaacaaaaaa
actaaagaagaaatcatcagtttagagaatataccagcattcttttttaaaaaggatatg
acagttaatgaaattttaaactatgcaaataatgatccatcaccaatcatatttcaaaag
ttggaacattattacactataatcgaggagaatatagttggtcatgttcgtgataaatct
ttattattcttttctgcaatgtctgatttaaaacaatttagatctcaattaattaattta
tcgaatcatattaaaaattcagaagaaacattaggtgaaattgatgataatattatacat
ggattaaatatatcaaaattatttcttcaaaagaatagaataaaggatacattagaaaca
ttatcattggtatcagaggttacacaagcacaacccgcattacaacttttactatctaaa
ggtgattatatgggtgcattggaattaatcaatagaactcaatcagctatctctttagaa
ttacattacatttcatcattaaagaatttatcaccacaattattggaaatgattaattta
atcgagaaaatgtcattacaagattttattaaatattcattaaatgatgaaatcctatta
agttcttcaccaaatagtaataataattcaccaatttttaataaactttctttaaaaaat
agaaatagaaataaaattaatagtagtaataatgaagaaaaagaagataatgaagattac
tatgatgaagaagacgatgatgatgatgatgatgatgaaaatataaactatgaatcatta
aatgaaaatttaaataattatttatcaccattaataattgtattattaaaagttggtaga
attcaagaagcattagaagaatttagagatgcatcaaatgaatcatttaaacaacttttt
aagaatactgttgcaaatataacctatcaattattggatagtggtggtagtagtcatcat
aaaacacccacaaactcattcaactctcaaaatttcaattggaatgattgtaaattaaaa
cttttaaaattatcttctaatgattcattaccattatttaaagctgttgaaaaagcattt
cgtaggaaattcattgtattttcaaaagttttagaattaattatagatattgtaaataat
aataatggaattaataataatggaattaataataataataataagaatggtgataaatca
ccaaatatatttggtgaaacagttattaatacttgtagtacagttgcatattcaataatt
gaaactatgcaagaaagaatatcatcattaatgaaagttaggggtgaaattaatgcaaaa
ttggcattaccagattttgtattactctataatcaaattgaatcatttttaaagtttact
gaatcttattcactttcaaaaagaaaaacaccaatcttaagatcatcaatattggctcaa
ttaaaaatgtttttagatattcttcatcaaaatagattatcatcattaaaattattatta
gaaaatgaagattgggtacaagttaaagtagtttctgaatttcaaaatattgtaaatagt
atagttcaacaatcaactgattataataataaagataataataaagataataataataat
aataataataatgaaaataataatatatcagatgaaatttatataaatagtgaaccattt
aaagttgtaaatacatcattaatgttattgaaatttataaatgactatttatgttgttgt
gaaaagttaccaacgattattatagattcacttccaaagattatagagattttaaataca
tttaatagtatgactcatcaattggtattgatggcaggtgctagacaaactatgaaattg
aaaactatcacttccaaacatttaggttatgcatcacaatcattaagttttcaaataaag
ttaataccatatataaaggtgatagtatcaagatcattaacagtgaaacagttatcatta
ttgaatggattggataagttgctacaagatttcgtttcacatagacaagagattttcaat
aaatttgtggttatcattaaagaaagatcaagttatcatcttaaagttttaggttcaata
gatttaagagatgatactttaccaattccaacaccaccaatagcatcactctcaaaagat
attacaacacttcataaattattagcttcaattttaccacctgatcaattatttaaagta
tttacaaatatttactttatgtttaatagtttattcattgaaaatctttcaaagtttgat
atgtctcataaattatcaaaaagaagaatacataatgatgttttacatttattaaattca
attcgtaatttgccaaatgctggtgatcctggtaatgatattgaagattatttaaatcaa
cattttccaatgtaa
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