Dictyostelium discoideum (cellular slime mold): DDB_G0273355
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Entry
DDB_G0273355 CDS
T00245
Symbol
rexo2-1
Name
(RefSeq) RNA exonuclease 2
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Pathway
ddi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
DDB_G0273355 (rexo2-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ddi03019
]
DDB_G0273355 (rexo2-1)
03009 Ribosome biogenesis [BR:
ddi03009
]
DDB_G0273355 (rexo2-1)
Messenger RNA biogenesis [BR:
ddi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DDB_G0273355 (rexo2-1)
Ribosome biogenesis [BR:
ddi03009
]
Eukaryotic type
Pre-60S particles
RNases
DDB_G0273355 (rexo2-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-GeneID:
8618865
NCBI-ProteinID:
XP_644763
dictyBase:
DDB_G0273355
UniProt:
Q556Y2
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All DBs
Position
2:2683400..2684488
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AA seq
190 aa
AA seq
DB search
MSTTPTYNHPVINERSKRMVWVDLEMTGLDISKDVILEMAIVITDAELNVIEKGPNLVIH
RSDEVLKNMNDWCIEHHGKSGLTEDVRNSKISLEEAEKIMLEFVRKHTDKGICPLAGNTV
HEDRRFLLKEMPTFAEHLHYRIIDVSTIKELSRRWYPYIPSPKKVCGHRALQDIEESIEE
LKSYRVTVFK
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccacaccaacatacaatcatccagttattaatgaacgttcaaaaagaatggtt
tgggttgacttggaaatgacaggtttggatatttcaaaagatgtaattttagaaatggct
attgtcatcactgacgcagagttaaatgttattgaaaaaggtccaaatttagtcattcac
agatcagatgaagttttaaagaatatgaatgattggtgtattgaacatcatggaaaatca
ggattaacagaagatgtaagaaattcaaagatatcattagaagaagcagagaaaataatg
ttagaatttgtgagaaagcatacagataaaggaatttgtccattagcaggtaatacagtt
catgaagatagaagattcttattaaaggaaatgccaacatttgcagagcatttacattat
cgtattattgatgtttcaacaattaaagagttatcaagaagatggtatccatacattcca
tcaccaaaaaaagtttgtggtcatcgtgcattacaagatattgaagaaagtattgaagaa
ttaaaatcttatcgtgttactgtttttaaataa
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