Dictyostelium discoideum (cellular slime mold): DDB_G0274279
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Entry
DDB_G0274279 CDS
T00245
Symbol
tssc1
Name
(RefSeq) WD40 repeat-containing protein
KO
K23289
EARP and GARP complex-interacting protein 1
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ddi04131
]
DDB_G0274279 (tssc1)
Membrane trafficking [BR:
ddi04131
]
Protein recycling
Others
Others
DDB_G0274279 (tssc1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EIPR1
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
WD40_RFWD3
Beta-prop_WDR75_1st
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_DCAF12
PEX11
DUF5014
Motif
Other DBs
NCBI-GeneID:
8619407
NCBI-ProteinID:
XP_643981
dictyBase:
DDB_G0274279
UniProt:
Q86A97
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Position
2:4037996..4039471
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AA seq
400 aa
AA seq
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MFNTNTSNISTNVYGLSQKTRALSHITAEADVNRFLVGTTALREENEIALLEAKEGEGVR
CLSIFPHPKEIHSITSCPFDSSLFFSVYNTSGGGNNNSNNTNNNDNTNNNTNNNDFKSSL
WRINESMDSIEELFELKGHTGIIKPILCDPSGSNNFIISLDDSNIRLWSKIDDQNEPTVI
KQFGNLSKLSVGSINPNISNQLATANDVNIKGWDFRNAKETFSMDKAHSEQIRDIDFNPN
KPYYLLSAGDDCKLKIWDTRQTRDPVKIFSGHNHWIWSAKFNRYHDQLIITSSSDNTVKL
WNLYSLSSAFNSENNISNSNEQQHSQQPNEQQPQQPPQPVKQKKNKRNEDQLIKTYEEHE
DSVYNISWSSSNFLFASLSYDGRFVVNNVPKEYSDILSYI
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatacaaatacatctaacatttcaacaaatgtatatggtttatcacaaaagaca
agagcattatcacatattacagcggaagcagatgtaaaccgatttttagttggaacaaca
gcattaagagaagagaatgaaattgcattattagaagcaaaagaaggtgaaggtgttaga
tgtttatcaatatttccacacccaaaagaaatccattcaataacgtcatgtccatttgat
tcatcattattcttttcagtatataatacatcaggtggtggtaataataatagtaataat
acaaataacaatgataatacaaataacaatacaaataataatgattttaaatcatcatta
tggagaattaatgaatctatggattcaattgaagaattatttgaattaaaaggacacaca
ggtataattaaaccaatcctttgtgatccatcaggttcaaataatttcattatctcatta
gatgattcaaacattagattatggtcaaagattgatgatcaaaatgaaccaacagttatt
aaacaatttggtaatctttcaaaattatctgttggttcaattaatccaaatatatcaaac
caattagcaactgcaaatgatgttaatattaaaggttgggattttagaaatgcaaaagaa
acatttagtatggataaagcacattcagaacaaattagagatattgattttaatccaaat
aaaccatattatttattatcagcaggtgatgattgtaaattaaagatttgggatactaga
caaactagagatcctgttaaaatattctctggtcataatcattggatttggtctgctaaa
tttaatagatatcatgatcaattaatcattacttcaagtagtgataacactgtaaaatta
tggaacctttattctttatcttctgctttcaatagtgaaaataatattagtaatagtaat
gaacaacaacactcacaacaaccaaatgaacaacaaccacaacaaccaccacaaccagtt
aaacaaaagaaaaataaaagaaatgaagatcaattaattaaaacttatgaagaacatgaa
gatagtgtttataatatatcatggagttcaagtaatttcttatttgcatctttatcttat
gatggtagatttgttgttaataatgtaccaaaagaatattccgatattttatcttatatt
tga
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