Dictyostelium discoideum (cellular slime mold): DDB_G0274325
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Entry
DDB_G0274325 CDS
T00245
Symbol
ddx52
Name
(RefSeq) DEAD/DEAH box helicase
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ddi03009
]
DDB_G0274325 (ddx52)
Enzymes [BR:
ddi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DDB_G0274325 (ddx52)
Ribosome biogenesis [BR:
ddi03009
]
Eukaryotic type
90S particles
Helicases
DDB_G0274325 (ddx52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Sigma54_activ_2
PTA_PTB
Motif
Other DBs
NCBI-GeneID:
8619377
NCBI-ProteinID:
XP_643949
dictyBase:
DDB_G0274325
UniProt:
Q86IZ9
LinkDB
All DBs
Position
2:3957548..3959667
Genome browser
AA seq
668 aa
AA seq
DB search
MDNSIFYSLGNGIKFNKNKYKKEIGIFNGITSHELDKQTKTNNKVHFFKNTTPSTPVISK
KDNIKQKKEEEEDNDNDNEESKEDDDFVEDDDNDDDDDDDDEDEENEEPKEKEFIKHQVN
NDEEEEDITLFNKSNENENSDDSDDSDDSGKNKNKNKNKKVSKETQEDKHKREIATFRNK
HRIKVDGTDIPDPMTEFSQLENRFKVRKYLLNNINEIGYKEPSPIQMQVIPILLKEREVV
AIAPTGSGKTASFSIPILQALYEPKKEGFRSVIIAPTRELAQQIYRNFRLLSKGKPFRIC
VLSKNLHNQSTNENLIKNYDILITTPLRLVYLIKENLLSLNKVEYLVFDEADKLFDKNFQ
EQVDIVVTACQNPKLKICLFSATMNQQVEELGHSIMKNPIKIIIGEQNAAAITVDQKLIY
VGKEEGKLLAVRQLIQKGLEPPILIFTQSKERAHDLFQELIFDGINVDVIHSERTQFQRD
TIVKKFRMGKIWVLICTELMARGMDFKGVNFVINFDFPHTLASYIHRIGRTGRAGRPGVA
YTLYTDADTPMLPTIVHAMKQSGSHVPDWMLNLKVQGKKKQQYRLKGVERESFSTIPLSE
RTSSKFKLRKNKKSFNLPGDQQKSNENNNNNNNNNNDNKKRKSFNNNGEKNNNPERKQKQ
IKKPKKII
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggataatagtatattttatagtcttggaaatggaattaaatttaataaaaataaatat
aaaaaagaaattggaattttcaatggtataacatctcatgaattagataaacaaactaaa
accaataataaagttcacttttttaaaaatacaacaccatcaacacctgtaatttcaaaa
aaagataatataaaacaaaaaaaagaagaagaagaagataatgataatgataatgaagaa
tcaaaagaagatgatgattttgtagaagatgatgataatgatgatgatgatgatgatgat
gatgaggatgaagaaaatgaagaaccaaaagaaaaagaatttataaaacatcaagtcaat
aatgatgaggaagaagaagatattacattatttaataaatcaaatgaaaatgaaaattca
gatgattcagatgattcagatgattctggaaaaaataaaaataaaaataaaaataaaaaa
gtttcaaaagaaacacaagaggataaacataaaagagagattgcaacatttagaaataaa
catagaattaaagttgatggtacagatataccagatccaatgacagaattttcacaatta
gagaatagattcaaagttagaaaatatcttttaaataatattaatgagattggttataaa
gaaccatcaccaattcaaatgcaagttataccaattcttttaaaagaaagagaagtcgtt
gcaattgcaccaactggttctggtaaaactgcatctttctccattccaatacttcaagca
ttatatgaaccaaaaaaggagggttttcgttcagttatcattgcaccaactcgtgaactt
gctcaacaaatttatcgtaattttagattactctctaaaggtaaaccatttagaatttgt
gttttatctaaaaatttacataatcaatcaacaaatgaaaatttaattaaaaattatgat
attttaattacaacaccattaagattagtttatttaattaaagaaaatttattatcatta
aataaagttgaatatttagtatttgatgaagcagataaattatttgataagaatttccaa
gaacaagttgatattgttgtaacagcatgtcaaaatccaaaattaaagatttgtttattc
agtgccactatgaatcaacaagttgaggaattgggtcattcaattatgaaaaatccaata
aagattataattggtgaacaaaatgctgcagcaattacagttgatcaaaaattaatttat
gttggtaaagaggagggaaagttattggcagttagacaattgattcaaaaaggtttagaa
ccacccattttaatattcactcaatctaaagagagagcacatgatttattccaagagttg
attttcgatggtatcaatgttgatgtaattcattcagagagaactcaattccaaagagac
acaatcgtaaagaaattccgtatgggtaagatttgggtactaatttgcacagagttgatg
gcaagaggtatggatttcaaaggtgtcaatttcgttattaatttcgatttccctcatacc
ctcgcttcatacattcacagaattggtagaactggtcgtgctggtagacctggtgtagca
tataccctctacaccgatgccgatactccaatgttaccaaccatcgttcatgctatgaaa
caatctggttctcatgttccagattggatgttaaatctaaaagttcaaggtaaaaagaaa
caacaatatagattaaaaggtgttgaaagggaatcattttcaacgattccccttagtgaa
agaacttcttcaaaattcaaacttagaaaaaataaaaaatctttcaatttacctggtgat
caacaaaaatcaaatgaaaataataacaataataataataataataatgataataaaaaa
agaaaatcttttaataataatggtgaaaaaaataataatccagaaagaaaacaaaaacaa
atcaaaaaaccaaaaaaaataatttaa
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