Dictyostelium discoideum (cellular slime mold): DDB_G0275141
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Entry
DDB_G0275141 CDS
T00245
Symbol
utp5
Name
(RefSeq) NUC189 domain-containing protein
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Pathway
ddi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
DDB_G0275141 (utp5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ddi03009
]
DDB_G0275141 (utp5)
Ribosome biogenesis [BR:
ddi03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
DDB_G0275141 (utp5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Utp12
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR3_1st
WDR55
Beta-prop_WDR5
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
EIF3I
WD40_MABP1-WDR62_1st
Beta-prop_ACSF4
Beta-prop_TEP1_C
Methyltransf_3
Beta-prop_TEP1_2nd
FH3_FHOD1-3
Motif
Other DBs
NCBI-GeneID:
8619765
NCBI-ProteinID:
XP_643725
dictyBase:
DDB_G0275141
UniProt:
Q8T2Q3
LinkDB
All DBs
Position
2:complement(<4955753..>4957779)
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AA seq
569 aa
AA seq
DB search
MTSVTTYDKDRELFARVGKDNKIEVFNSFNCKLLHTFVEIEESKNQIILLTFSTHDKSEK
KEYYKNLVAVSNSGKIYMYDCIDFKKKGIFDTHSKNITAVVLGKRYLFTSSHGGKVSQWD
IKTKHIIRSFESSEKSISSMGLNNRESQLAIANNDITFIDLSNFKESKKVSTGSNSIKQI
QFTQDDKFLICNRYQPTIQIYNIEKLTANNTNTTEPTFTLNATSPTKSISIFTHEIKRAS
KTVTQYLISSLLQNSQINIWAYYQDDQYNTDAETPITEITNKSNQIISMNFHSASELILA
FFEKEKYQFERVKFFDKKSFIKSITVENPIEFDKTTTINNKKQKTSETISIQGNAAEMKQ
DKVNLPTIKKSTDSIASAGTIVDLIAQSLKSDNDNLLLSSIKVNFNVIQSTVKSLPSPYA
YSLLSKLLKYLATDNSKSLIVLPWINCIIKDHSSYLLSVPNLSKKLSVLNTIIQDKFELH
NRLSKLVGKFELISSQTKGDKTESIDYEPSLVYDEASDNEQQDADGDMVEEDDEDDESDE
FDGMEGADDEDDEEIDDDIADLMDDDDDL
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgacatctgttactacttatgataaagatagagaattattcgctcgtgttggtaaagac
aacaagatcgaagttttcaactcttttaattgtaaacttttacacacattcgtagaaatt
gaagaatcaaaaaatcaaattattttattgacattctcaacacacgataaaagtgaaaaa
aaagaatattataaaaatttagtagcagtatcaaattcaggtaaaatttatatgtatgat
tgtattgattttaagaaaaaaggtattttcgatacccattcaaaaaatataacagcagta
gtattaggtaaaagatatttattcacatcaagtcatggtggtaaagtttcacaatgggat
ataaagacaaaacatatcataagatcatttgaatcatcagagaaatcaatttcatcaatg
ggattaaataatcgtgaatctcaattagctatagcaaataatgatatcacattcattgat
ttatcaaactttaaagaatctaaaaaagtttcaaccggttcaaattcaatcaaacaaatt
caattcactcaagatgataaatttttaatttgtaatagatatcaaccaaccattcaaatt
tataatatagagaaattaacagcaaataataccaatactacagaaccaacttttacttta
aatgcaacaagcccaactaaatcaatttcaatttttactcatgaaataaaacgtgcttca
aaaactgttactcaatatttaatttcttcactcttacaaaattcacaaattaatatttgg
gcttactatcaagatgatcaatataatacagatgctgaaactccaatcaccgaaattaca
aataaatcaaatcaaattatttcaatgaatttccattctgcttctgaattaattttagct
ttctttgaaaaagaaaaatatcaatttgaaagagttaaattttttgataaaaaatcattt
attaaatcaattacagttgaaaatccaattgaatttgataaaactacaacaattaataat
aaaaaacaaaaaacatcagaaaccatttcaattcaaggaaatgcagcagagatgaaacaa
gataaagttaatttaccaacaattaaaaaatcaacagattcaattgcatcagctggtaca
atcgttgatttaattgctcaaagtttgaaatctgataatgataaccttttattatcttca
attaaagttaatttcaatgttattcaaagtactgttaaatcattaccatctccatacgca
tatagtcttttatcaaaattattaaaatatttagcaactgataattcaaaatcattaatt
gttttaccatggattaattgcattattaaagatcattcaagttatttattatcagtacca
aatttatcaaagaaattatcagttttaaatacaattattcaagataaatttgaattacat
aatagattatcaaaattggttggtaaatttgaattaatttctagtcaaactaaaggtgat
aaaactgaatcaatcgattatgaaccaagtcttgtttatgatgaagctagtgataatgag
caacaagatgctgatggtgatatggttgaagaagatgatgaagatgatgaatctgatgaa
ttcgatggtatggaaggtgctgatgatgaagatgatgaagaaatcgatgatgacatcgct
gatttaatggatgatgacgatgatttataa
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