Dictyostelium discoideum (cellular slime mold): DDB_G0275323
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Entry
DDB_G0275323 CDS
T00245
Symbol
tipD
Name
(RefSeq) autophagy protein 16
KO
K17890
autophagy-related protein 16-1
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Pathway
ddi04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
DDB_G0275323 (tipD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ddi04131
]
DDB_G0275323 (tipD)
03029 Mitochondrial biogenesis [BR:
ddi03029
]
DDB_G0275323 (tipD)
Membrane trafficking [BR:
ddi04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
DDB_G0275323 (tipD)
Others
Specific organelles associated proteins
Auto phagosome
DDB_G0275323 (tipD)
Mitochondrial biogenesis [BR:
ddi03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
DDB_G0275323 (tipD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG16
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WDR55
Beta-prop_EML
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
WD40_RFWD3
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_EIPR1
Beta-prop_WDR35_TULP_N
Beta-prop_VPS8
DUF7711
Beta-prop_HPS5
Beta-prop_DCAF12
Cytochrom_D1
VPS8_N
WD40_like
PD40
Alpha-2-MRAP_C
Beta-prop_SPT8
Fez1
Crescentin
Motif
Other DBs
NCBI-GeneID:
8619939
NCBI-ProteinID:
XP_643673
dictyBase:
DDB_G0275323
UniProt:
O15736
LinkDB
All DBs
Position
2:5406103..5408018
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AA seq
612 aa
AA seq
DB search
MFSSQNNSYMMMMGGGGIGNINNNQFYSPIISTSAQSFNSIVEWKRDIIRQLNDRNQNQT
NNYSEFMRIYTDLLKRERTLNDRTLLYEKEIVSLRNEKKTQQQPPSGSSKMDSSSSSSSS
NRVSGMGSTIEEMEQKLFKLQEDLTNSYKRNADNASSILLLNDKNKDLQNELMSKEIEIE
RIRSTIQQDLDSIKRLEMVVIEKENVSQIIRDELSSLQTEFLHNESKVVKLEQENSSLVE
RWLRKKNEEASKMNEANDFYQKMVEQRDSTPAKAAVQLSESISNLVVKLPDANDVPIPIV
LERGVFSSEAMLPSKAKKRWTGHNSEIYCMAFNSIGNLLATGGGDKCVKVWDVISGQQKS
TLLGASQSIVSVSFSPNDESILGTSNDNSARLWNTELGRSRHTLTGHIGKVYTGKFINSN
RVVTGSHDRTIKLWDLQKGYCTRTIFCFSSCNDLVILGGSGTHLASGHVDHSVRFWDSNA
GEPTQVLSSIHEGQITSITNSPTNTNQILTNSRDHTLKIIDIRTFDTIRTFKDPEYRNGL
NWTKASWSPDGRYIASGSIDGSICIWDATNGKTVKVLTKVHNNGSSVCCCSWSPLANIFI
SADKDKNIIQWE
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgttttcatcacaaaataattcatatatgatgatgatgggtggtggtggtattggtaat
ataaataataatcaattttattcaccaattattagtacatcagcacaatcatttaattca
atagtagaatggaaaagagatattataaggcaattgaatgataggaaccaaaatcaaacc
aacaattactctgaattcatgagaatatatacagatttattaaagagagaacgtacatta
aacgatcgtacattgttatatgaaaaagagatagtttcattaagaaacgagaaaaagaca
caacaacaacctccatcaggttcctctaaaatggattcgtcgtcgtcgtcgtcttcatcg
aatcgtgttagtggtatgggatcaacgattgaagaaatggagcaaaaactattcaaactt
caagaagatttaaccaatagttataaaagaaatgctgataatgcctctagcattctatta
ttaaatgataagaataaagatttacaaaatgaattaatgtcaaaagagattgaaatcgaa
agaattcgatcaactattcaacaagatttagattcaataaaaagattagaaatggttgta
attgaaaaagaaaatgtttcacaaattattagagatgaattatcatcattacaaacagaa
tttttacataatgaaagtaaagttgtaaaattagaacaagagaatagtagtttagttgaa
agatggttaagaaaaaagaatgaagaagcaagtaaaatgaatgaagcaaatgatttttat
caaaagatggtagaacaaagagatagtacaccagctaaagctgctgtacaattgagtgag
agtatttcgaatttggtggtgaaattaccagatgccaatgatgtaccaatacctattgta
ttggagaggggtgtattttcatcagaggcaatgctaccgagtaaagcgaaaaagagatgg
acaggtcataattctgagatctattgtatggctttcaattcaattggtaatcttttggca
actggtggtggtgataaatgtgtaaaggtttgggatgtaattagtggtcaacagaaatca
acgttattgggtgcctcacaatcgattgtatcggttagtttctcaccaaatgatgaatcg
atattgggcacgagtaatgataattcagcacgtctttggaatacggaattgggtcgttca
agacacacattgactggccatattggtaaggtgtatacgggtaaattcataaactcgaat
cgtgtggtcacgggcagtcatgatcgtactatcaaattgtgggatcttcaaaagggttat
tgtacacgtaccatcttttgtttctcaagttgtaatgatttggtgatcctaggtggtagt
ggcactcatttagctagtggtcatgtcgatcatagtgtcagattttgggattcaaacgct
ggtgaaccaactcaagtactctcatcgattcacgagggtcaaatcacttcaatcacaaat
tcacccacaaataccaatcaaatccttacaaactctcgtgatcataccctaaagatcatc
gatatacgtacctttgatacaattagaacctttaaggatccagaatatcgtaatggtcta
aattggactaaagcttcttggtctccagatggtcgttatattgcatcaggttcaatcgat
ggttcaatttgtatttgggatgctacaaatggtaaaaccgttaaagttttaacaaaagtt
cataataatggttcttcagtttgttgttgttcttggtcaccattagcaaatatttttata
tctgctgataaagataaaaatataattcaatgggaataa
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