Dictyostelium discoideum (cellular slime mold): DDB_G0275443
Help
Entry
DDB_G0275443 CDS
T00245
Symbol
helB1
Name
(RefSeq) DEAD/DEAH box helicase
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Pathway
ddi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
DDB_G0275443 (helB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ddi03041
]
DDB_G0275443 (helB1)
Enzymes [BR:
ddi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DDB_G0275443 (helB1)
Spliceosome [BR:
ddi03041
]
Complex A
U2 snRNP components
U2 related factors
DDB_G0275443 (helB1)
Complex B
DDB_G0275443 (helB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
8620090
NCBI-ProteinID:
XP_643509
dictyBase:
DDB_G0275443
UniProt:
Q553B1
LinkDB
All DBs
Position
2:complement(5780689..5784247)
Genome browser
AA seq
1151 aa
AA seq
DB search
MDEYDKKRRLEHGGSDRSRSSNDNRNSHGSSGNNYRDDRKDDRYYRDDRSHYNNNNNNNN
NNNNNNNNNNGNGYRDDRNYSSQNKYQNHHQQSPPQQQQQQQNSSYVPSQPPQQQTQTQQ
QPHIQAPPPAKPRKSRFDQAPETIPIQAPQQPPMISNQPIFKQQPMYQQPMYQQKQQQPQ
PPIFQQQQKQQQPPIFQHHQPPPIYQQPPVYQQQQQQQQPVFQQQQQQRVATEAIQFQQT
PQQLAIEQERLKQERENEKKIEQANLEEEMKKRREKVEQWRKQKLEQELKASGSSNSGST
SSPPTTTTTTTKTTAATTTATTSPLTIPSQQQQTATTSPIKKKWSLEEEEETAQPLVNTN
IEQKEIKLPPTANIPAAAATTTSATINTTTIKQSIEEDDDIDPLDAYMENLNKEANLNLK
KSKTSQMIDDDEKLEEESEGEDDGKDKTIKKGKKEMLHTDHTSIKYAEFQKNFYIEVPVL
ANMTETEVLDFRSELGVKITGKDCPKPIQSWAQAGLTEKVHLLLKKFQYEKPTSIQAQTI
PAIMNGRDLIGIARTGSGKTLAFLLPMFRHILAQPKSAPGEGMIALIMSPTRELALQIHV
ECKKFSKVLGLRTACVYGGASISEQIAELKRGADIVVCTPGRMIDILCANNRRITNLRRV
TFLVLDEADRMFDMGFGPQINCIVDSIRPDRQTIMFSATFPPKVENVAKKILNKPLEIIA
GGRSIVSSDIEQFVEVRPTETRFRRLIELLSIWYHKGQILIFTNRQETTDNLYRQLSNSQ
YQCLSLHGSKDQTDRDETISDFKNKVKTILIATPLASRGLDIKDLNLVVNFDCPDHLEDY
VHRVGRTGRAGNRGTAYTFITPDEERFSSSIIKALEQSGSKVPDELRKLNDTYEKKRKEG
KDVLLAPTGFTGRGHKFDAAEEDKKNIERKQQRKAYGIEEEEEEEDEDKEKAEKEKLAAA
SAEKEKQLLSEKEKLDPATTNTIVIPGVDGTIITPSSLLQTDPSVPVGQQAINQIFGISQ
VTSSEEAIKKLQLAAQLGMKGNIQKLNNQITPLNQTHFIEELEINDYSQQARWKVTHKDA
LLEITNFTNTTITTKGTFFPPNKIPAPGERKLYLYIEGPSDASVKNAKSDIKKILDEVQS
THQSTGKYSVF
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atggatgaatatgataaaaaaaggagattagaacatggaggatcagatagaagtagatct
tcgaatgataatagaaattcacatgggtcaagtggtaataattatagagatgatagaaaa
gacgatagatattatagagatgatagaagtcattataataataataataataataataat
aataataataataataataataataataatggaaatggttatagggatgatagaaattat
agcagccaaaataaatatcaaaatcaccatcaacaatcaccaccacaacaacaacaacaa
caacaaaactcatcatatgtaccttcacaaccaccacaacaacaaacacaaacacaacaa
caaccacatatacaggcaccaccaccagctaagcctagaaaatctagatttgatcaagca
cctgaaacaattccaattcaagcaccacaacaaccaccaatgatatcaaaccaaccaatt
tttaaacagcaaccaatgtatcaacaaccaatgtatcaacaaaaacaacaacaaccacaa
ccaccaatatttcaacaacaacaaaaacaacaacaaccaccaatatttcaacatcatcaa
ccaccaccaatttatcaacaaccaccagtttatcaacaacaacaacaacaacaacaacca
gtttttcaacaacaacaacaacaaagagttgcaaccgaagcaattcaatttcaacaaact
ccacaacaattagcaattgaacaagagagattaaaacaagaaagagagaatgaaaagaaa
attgaacaagcaaatttagaagaggagatgaaaaagagaagagaaaaagttgaacaatgg
agaaaacaaaaattggaacaagaattaaaagcttcaggaagtagtaatagcggatctact
tcttctccaccaacaacaacaacaacaacaacaaaaacaacagcagcaacaacaacagct
acaacatcaccattgacaataccatcacaacaacagcaaacagctacaacatcaccaata
aaaaagaaatggagtttagaagaagaggaagaaacagctcaaccattagttaatacaaat
atagaacaaaaagaaataaaattaccaccaactgcaaatataccagcagcagcagcaaca
acaacatcagctactataaatacaactacaataaaacaatcaattgaagaagatgatgat
atagatccattagatgcatatatggaaaatttaaataaagaagcaaatttaaatttaaag
aaatcaaaaacatcacaaatgattgatgatgatgagaaattagaggaggaatcagagggt
gaggatgatggtaaagataaaaccattaaaaaaggaaagaaagagatgttacatactgat
catacctcaataaagtatgcagaatttcaaaagaatttttatattgaagtgccagtattg
gccaatatgactgaaacagaggtattggattttcgatcagaattgggtgtgaaaatcact
ggtaaagattgtccaaaaccaattcaatcatgggcacaagctgggttaactgaaaaggtt
catttactattaaagaaatttcaatatgaaaaaccaacatcaattcaagcacaaactata
cctgcaattatgaatggtcgtgatttaattggtattgccagaactggttccggtaaaaca
ttggcattccttttaccaatgtttcgtcatatactggcacaaccaaaatctgcacctggt
gaaggtatgattgcattgattatgtcaccaactagagaattggcacttcaaattcatgtt
gaatgtaaaaagttttcaaaagtacttggattacgtaccgcttgtgtttatggtggtgca
agtataagtgaacaaatagccgaattgaaaagaggtgccgatattgtcgtttgcacacca
ggtcgtatgatcgatattttatgtgcaaataatcgacgtatcaccaacctaagacgtgta
acattcttggtgttggatgaagccgatcgtatgtttgatatgggttttggtccacaaatt
aattgtatcgtcgatagtattagacccgatcgtcaaaccattatgttctctgcaactttt
cctccaaaagttgagaatgtcgcaaagaagatcctaaacaaaccattggaaatcattgct
ggtggtagaagtatagtttcatcagatattgaacaatttgtagaggtacgtccaactgaa
actagatttagacgtttaatagaattgctatcgatttggtatcataaaggtcagatttta
atctttaccaatcgtcaagagaccaccgacaatctatatcgtcaactttcaaactctcaa
tatcaatgtctatcattacatggtagtaaagatcaaaccgatcgtgatgaaaccattagt
gactttaaaaataaggttaaaaccattttaatcgctacaccattggcatcacgtggtttg
gatatcaaagatttaaatcttgtggttaatttcgattgccctgatcatttggaagattat
gttcatagggtaggtagaactggtagagcaggaaatcgtggtactgcttatacatttatc
acacccgacgaagagagattctcttcgtcaatcattaaagctttggaacaatctggttca
aaagtacccgatgaacttagaaaattgaatgatacctacgagaaaaagagaaaagaaggt
aaggatgtactattggcaccaaccggtttcactggtagaggtcataaatttgatgctgcc
gaagaggataaaaagaatattgaaagaaaacaacaaagaaaagcatatggtatcgaagag
gaagaagaagaagaggatgaagataaagaaaaagctgaaaaggagaaattggccgctgct
tccgctgaaaaagaaaaacaattattatctgaaaaagaaaaattggatcctgctaccact
aatactatcgtcatacctggtgtagatggtacaatcattacaccttcttcattacttcaa
accgatccttcagttcctgtgggtcaacaggctatcaatcaaatatttggtatttcacaa
gttacctcctccgaagaagcaattaaaaaacttcaattggccgctcaattaggtatgaaa
ggtaatattcaaaaattaaataatcaaataactccattaaatcaaactcatttcattgaa
gaattagaaattaatgattattctcaacaagctcgttggaaagttactcataaagatgct
ttacttgaaattaccaattttacaaatactacaattacaacaaaaggtacattctttcca
ccaaataaaataccagctccaggtgaaagaaaattatatttatatattgaaggtccatct
gatgcatctgtcaaaaatgcaaaatctgatattaaaaagattctcgacgaagttcaatca
actcatcaaagtactggaaagtattctgtattttaa
DBGET
integrated database retrieval system
