Dictyostelium discoideum (cellular slime mold): DDB_G0276029
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Entry
DDB_G0276029 CDS
T00245
Symbol
DG1040
Name
(RefSeq) hypothetical protein
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Pathway
ddi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DDB_G0276029 (DG1040)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ddi03019
]
DDB_G0276029 (DG1040)
Messenger RNA biogenesis [BR:
ddi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
DDB_G0276029 (DG1040)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
DDB_G0276029 (DG1040)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
ARM_Cnot1
NOT1_connector
TFIIA
Motif
Other DBs
NCBI-GeneID:
8620365
NCBI-ProteinID:
XP_643319
dictyBase:
DDB_G0276029
UniProt:
Q75JL4
LinkDB
All DBs
Position
2:complement(6435703..6443825)
Genome browser
AA seq
2526 aa
AA seq
DB search
MSTKPSEIDLKKSSEVNNDSINNDNNNNSINNNDNNNNGNNKEETSEYTDPNNIFNKFNK
LSSDKSFYKTWTLQVGSNNNNEQTDSNTISNLSFVIATQIKNLISNLTKKSYKSNSSELS
QIINQYGSQAEIYIFRCLVDSIDFKNTNTPITTSPTTTSATSTTTSTPTTPSTTASSTAA
SSSSSNQLKIQLFKDEFSRLTKQPHFISVLCKAFDGYEVLNNEFLVHFSSTLKLTPSHEI
MLGLALSQSLDKEVREQADKFLLNTLIQLSQSNTKSLPENLLHQLLYKFKIQETNQLQQQ
NNQQQQNNQQQQQQQQQQQQQQQQQQQQQQQNSQQQQNQQHYSEVIKYLQSISPPNSLAL
SPLVDNDQSSGSGGGGITNSKRLQQDNPSYVNSIISKVSQQNVPYQIISSIGYSSCSSAS
TLKDILFQFQKLTESDIAQIIVSMAELTSNTNNNNNNNNENNDENEKTKIPYLTFNDLND
KETSNTSPTSSSPKQQSENESSSTTTTTNSNNNNNNNTTNIPDEWNISIFVDVIKELYPT
IDWDIVIREMDCPIVNNMDQRGLAFILAVYKKATQVDQQQSKPFPIDFILDRVWVNSLSQ
IQFLKIAIQSDFFPFQNSTKKRIDQSSLSKSTPPTIAHWNSISLIETLLQLSDIDSEHYS
KVKPLFDSPIKNCLDLLILGVSSITLKKNKLQNELLTTLFQTLLSQHNYQSIVSQLWKDH
PLTVIQIMADITQKDPKELSRLLDVAQELKILRQMLYCKTYPFIVNLAALASQREYLFLE
RWVQERMKEDDHQSFIKECISFLNDRVLKKGKSGEENSNTAASASPTTATTGSGSFPPQS
IQISNNVLSTLCKTLMAAPDQIPTDLFNDLKNISAALQTAESETTERRFPAEVEDETNSY
FIKLYSGEISVDQIISVLKEYKVSKNQKDQDIFKCLLFNLFDEYKFLSDYPDKELKITGL
LFGSLIKNQLISSQPLRVALKYVLEAMRFPLNSNMFIFGVNSLISFANRLVEWPQYWAQI
CSIDHFRDNYGDIILSVNKIIESSDPIKNGMEFQQQQQPQQQQQQQQPQQQPQQQKSANS
PPATTILSSQQIQDAENFTYDSNTSSGNVGGGGNDISADQYHQLTPQQQQQLLQQQQMLQ
QQQLLQHKMAQQLQLQQQIQLQQQHHQHQQLQQQQQQQHHQQHHHHQQQQQHHQQHQQQQ
QQQQQQQPNGKDDDKRKKDQEDAFSTTIPIGTLLNASKEMIQPDDITKDKIYFIINNISQ
NNLDVKAKDLKDILKPEYYDYFAQYLVVKRVSIEANFHALYLAFIDRLCIPTISERVLFH
SHQNVHTLLKSEKIRVDHSERSLLKNLGGWLGLNTLARNKPLLQKVISPKDLLIYAAENG
LLIAIVPFVAKLLEHCQQSKVFRPPNPWVMAILRLMVEIYQLKESKNNIKFEVELLCNNL
SVDINTVKPTTILADRRQQREIEQQEENMRKDNKQSSIDLLSNLPRYLVYTPSIGAYAQS
PIFKKAVPLAFDKAVREIIAPVVERSVAIAVITSKELVSKDFATEADEQKMKRASHLMVQ
NLAGSLALVTCKDPLRVSIIAYLRTLLQNNNGLPPCEIPLEHAISLVCNENLDFACSIVE
TAATEKAIISIDEVLASSYNDRLKHREQMGSQPFFDMGYLTTTIYNTLPESLRPKPGGIQ
PDQFRVYEDFTNLPHHINISNVGGAGETDNLTASPTNDIVSGAIKSTGVMSQQLVQQQMQ
QQVSQQILQQQQQQQIQMQLLQQQAQQAALQAAQQQHQQQQQQQQQVQQQQQQVQQQQQQ
QQQNLPNSDLLEKFGLLLNEVDKVVIRVLAQTQNIELELLYTISQQILTLVRMSQSQSEL
LAGFAQRLCNRLCEQEKKPIYEIYFELLEVLRDWDQKVITTITSFLLFSTPDKKLNRVLV
AGLIIHQLININEYDLALSKMMIDSRSAPPIDFAISLLRFCLVENNYANLSEFPSTFDLL
QKISSRSPSEMLAKTLEEIKNSPKEEKKRRISRIRQEDMIVDPPGLREAVIALLQDWLLF
SSTNTDQKILIQYLGQVLQISFMKNELYFIKFFRLGLEYALERYAANVEIQSPQYLEIDS
WCRFVVMMVKHADPTKLNMLTKVLSVLIKILTKDYENNPSRFNQRPYLRIFENLLVDLTS
PDPILEHVSNHILFCFVNALATLQPQKYPGFCFAWLDLLSHKSFMPKLLIRQQKQWFHAL
LVQHFKFLEPFLRGGDLSEPVRVLYKGTLKVLLLLLHDFPEFLCEYHFSLCDVIPNTCIQ
LRNLILSAFPRNMRLPDPFTPNLKIDMLPDINQPPKISSNFTASLKGLKIEIDNYFKNRG
PYSFLLDLKNKHLLLTDKEEILAAGTKYNVPLINSLVLYIGTLAIPQIQRKSGVAPTPSQ
SAPMDIFHRLALDLDSEGRYIFFNAIANQLRYPNNHTHYLSCVILFLFSESGQDIIKEQI
TRVLLERLISNKPHPWGLLITFIELIKNLRYNFWSHGFTKVAPEIAQLFDSVAKSCLNRE
SSNLSQ
NT seq
7581 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactaaacctagtgaaattgatttaaaaaaatcatcagaagttaataacgatagt
attaataacgataataataataatagtattaataataatgataataataataatggtaat
aataaagaggaaacatcagaatatactgatccaaataatatttttaataaatttaataaa
ctttcatcagataaatcattttataaaacgtggacacttcaagttggaagtaacaataat
aatgaacaaacagacagtaatacaattagcaatcttagttttgtgattgcaactcaaatt
aaaaatttaatttcaaatttaactaaaaaatcttataaatcaaattcttcagaattatcg
caaataattaatcaatatggtagtcaagctgaaatttatatttttagatgtttagtagat
agtattgattttaagaatacaaatacaccaattacaacatcaccaactactacatcggca
acttcaacaacaacttcaacaccaacaacaccatcaacaacagcatcatcaacagcagca
tcatcatcatcatcaaatcaattaaagattcaattatttaaagatgaattctcaagatta
actaaacaaccacatttcatcagtgtactttgtaaggcatttgatggttatgaggtttta
aacaatgaattcttggtacacttttcatcaactttaaagttaacgccatctcatgaaatt
atgttaggtttagcactctctcaatcattagataaagaagtacgtgaacaagccgataaa
tttttattaaatactttaattcaattatcacaatcaaatacaaaatcattacctgaaaac
ttattacatcaattattatataaatttaaaattcaagaaacaaatcaattacaacaacaa
aataatcaacaacaacaaaataatcaacaacaacaacaacaacaacaacaacaacaacaa
caacaacaacaacaacaacaacaacaacaacaaaacagtcaacaacaacaaaatcaacaa
cattattcagaagtaattaaatatcttcaatcaatttcaccaccaaattcattagcatta
tcaccattagtagataacgatcaaagtagtggtagtgggggtggtggaattaccaactcc
aaaagattacaacaagataatccatcctatgtaaattcaatcatctctaaagtctctcaa
caaaatgtaccctatcaaattatatcaagcattggatattctagttgttcatccgcttct
actttaaaagatattttattccaatttcaaaaattaacagaatctgatatagctcaaatt
atagtttcaatggcagaattaacaagtaatactaataataataataataataataatgaa
aataatgatgaaaatgaaaaaactaaaattccttatttaacatttaatgatttaaatgat
aaagaaacttcaaatacatcaccaacatcttcttcaccaaaacaacaatctgaaaatgaa
tcatcatcaacaacaacaacaaccaatagtaataataataataataataatacaacaaat
ataccagatgaatggaatatttcaatttttgtagatgttatcaaagaattatatccaaca
attgattgggatatagttattagagaaatggattgcccaatcgttaataatatggatcaa
cgtggtttggcattcattttagctgtatataaaaaagcaactcaagttgatcaacaacaa
tccaaaccattcccaattgattttattctcgatagggtttgggtaaattcattaagtcaa
attcaatttttaaagattgcaattcaatctgatttcttcccattccaaaattctacaaag
aaaagaatcgatcaatctagtctcagtaaatcaacaccaccaactattgctcattggaat
tcaatctctttaattgaaactttacttcaattatctgatattgattctgaacattattca
aaagttaaaccattatttgattctccaattaaaaattgtcttgatcttttaattttaggt
gtttcttcaattacacttaaaaaaaataaattacaaaatgaattattaacaacattattt
caaactttattatcacaacataattatcaatcaattgtttcacaattatggaaagatcat
ccattaacagttattcaaataatggctgatataactcaaaaagatccaaaagaattatca
agacttttagatgtagcccaagaattaaagattcttagacaaatgttatattgtaaaaca
tatccatttattgtgaatttagcagctttagcatcacagagagaatatttatttttagaa
cgatgggttcaagaaagaatgaaagaagatgatcatcaaagtttcattaaagaatgtatt
tcttttttgaatgatcgtgtattaaagaaaggaaaaagtggtgaagaaaactccaataca
gcagcatcagcatcaccaacaacagcaacaacaggatcaggatcattcccacctcaatca
attcaaatttcaaataatgtattatcaacactttgcaaaacattaatggcggctcctgat
caaattcctacagatttatttaatgatttaaagaatattagtgcagcacttcaaacagca
gaatctgaaaccacagaaagaagattccctgcagaagttgaagatgaaacaaattcttac
tttattaaattatattctggtgaaatttctgttgatcaaattatttctgtattaaaagaa
tataaagtttcaaaaaatcaaaaggatcaagatatattcaaatgtttattatttaattta
tttgatgaatataaattccttagtgattatccagataaagaattgaaaattacaggttta
ttatttggatcattgataaagaatcaattgatttcctcacaaccattaagagttgcatta
aaatatgtattggaggcaatgagattcccattgaatagtaatatgtttatttttggtgta
aattcattaatctcatttgcaaatagattggttgaatggccacaatattgggctcaaatt
tgttcaatagatcattttagagataattatggcgatataattttatcagttaataaaatc
attgaatcaagcgatccaataaaaaatggtatggaatttcaacaacaacaacaaccacaa
caacaacaacaacaacaacaaccacaacaacaacctcaacaacaaaaatctgcaaattct
ccacctgctactacaatcctatcatctcaacaaatccaagatgcagagaatttcacctat
gattcaaatacttcaagtggtaatgttggtggtggtggtaatgatatttcagccgatcaa
tatcatcaattaactccacaacaacaacaacaattattacaacaacaacaaatgttacaa
caacaacaattactacaacataaaatggctcaacaattacaattacaacaacaaatacaa
ttacaacaacaacatcatcaacatcaacaattacaacagcaacaacaacaacaacatcat
caacaacatcatcaccatcaacaacaacaacaacatcatcaacaacatcaacaacaacaa
caacaacaacaacaacaacaaccaaatggtaaagatgatgataaaagaaaaaaagatcaa
gaagatgcatttagtacaaccataccaattggtacacttttaaatgcatcgaaagaaatg
attcaaccagatgatattaccaaagataagatttactttattattaataatatttcacaa
aataatttagatgttaaagcaaaagatcttaaagatattttgaaaccagaatactatgat
tactttgctcaatatcttgttgtaaagagagtttcaattgaagcaaatttccatgcactt
tatcttgcatttattgaccgtctttgtattccaacgatttcagagcgtgtacttttccat
tctcatcaaaatgttcatacccttttaaaatcagaaaagattcgtgttgatcatagtgaa
cgttcactcctaaagaatttgggtggttggttaggtttaaatactttggctcgtaataaa
ccattgttacaaaaggtcatttcaccaaaggatcttttaatttatgcagcagagaatggt
ttattaattgcaatcgttccatttgttgcaaaactattggaacattgtcaacaatcaaaa
gtattcagaccaccaaatccttgggtgatggcaatattacgtttaatggttgaaatttat
caattgaaagaatccaaaaataatatcaaattcgaagtggaattactttgtaataattta
tccgttgatattaatactgttaaaccaacaaccattctagccgatcgtcgtcaacaacgt
gaaattgaacaacaagaagaaaacatgagaaaagataataaacaatcatcaatcgattta
ctttcaaatcttccacgttatcttgtttacactccttccattggtgcctatgctcaatca
ccaatctttaagaaagctgtacctttggcattcgataaggcagttcgtgaaatcatcgct
ccagtagttgaaagatcagttgccatcgctgtaattacctctaaagaattggttagtaaa
gattttgccaccgaagctgatgaacaaaaaatgaagagagcctctcatttaatggttcaa
aatcttgctggtagtcttgctttggtcacttgtaaagatccacttcgtgtttcaatcatt
gcttaccttagaactcttcttcaaaataataatggtcttccaccttgtgagataccatta
gagcatgcaattagtttggtttgtaatgaaaatttagattttgcttgttccatcgttgaa
accgctgccactgaaaaagcaatcatttccatcgatgaagtattggctagtagttacaat
gatcgtcttaaacatagagaacaaatgggttcacaaccattctttgatatgggttatctc
accactacaatctataatactctcccagaatcattacgtccaaaaccaggtggtattcaa
ccagatcaatttcgtgtctatgaagatttcactaatcttccacatcatataaatatttca
aatgttggtggtgctggtgaaactgataatttaactgcttctccaactaatgatattgtt
agtggtgctattaaatcaactggtgttatgtcacaacaattggttcaacaacaaatgcaa
caacaagtttctcaacaaattttacaacaacaacaacagcaacaaattcaaatgcaatta
ttacaacaacaagctcaacaagctgctcttcaagctgctcaacaacagcatcaacaacaa
caacaacaacaacagcaagttcaacaacaacaacaacaagttcaacaacaacaacaacaa
caacaacaaaatttaccaaattcagatcttttagagaaatttggattattattaaatgaa
gttgataaagttgtaattagagttttagctcaaactcaaaatattgaattagaactttta
tatacaattagtcaacaaattcttacattagttcgtatgtcacaaagtcaatcagaatta
ttagcaggttttgcacaaagattatgtaatagattatgtgaacaagaaaagaaaccaatt
tatgaaatttattttgaacttttagaagttttacgtgattgggatcaaaaggttattacc
accattacatcattccttttatttagtacacctgataagaaattaaatcgtgtattggta
gcaggtttaatcattcatcaattgattaatataaacgaatatgatttggcactctcaaag
atgatgatagattcacgttcggctccacccattgattttgcaattagtctattaagattc
tgtcttgttgaaaataactatgcaaatctttcagagtttccatcaacttttgatctcctt
caaaagattagtagtcgttcaccatcggaaatgttggccaaaactcttgaagaaattaaa
aactcaccaaaagaagaaaagaaacgtcgtatctctcgtattcgtcaagaggatatgatt
gttgatccaccaggtcttagagaggctgtcattgctcttcttcaagattggttacttttc
tcatcaaccaataccgatcaaaagatactcattcaatatcttggtcaagtattacaaatt
agttttatgaagaatgaactttactttattaaattctttagattgggtttagagtatgca
ttggaacgttatgctgcaaatgttgaaattcaatcaccacaataccttgagattgactct
tggtgtagattcgttgtaatgatggtcaaacatgccgatccaaccaaactcaatatgtta
accaaagtcttaagtgtcctaattaaaatcctcaccaaagactatgaaaataatccatca
cgtttcaatcaacgtccttaccttagaatatttgaaaatcttttggtcgatttaacctca
ccagatccaatacttgaacatgtctcaaatcatattctcttttgttttgtcaatgctttg
gcaacacttcaaccacaaaagtatccaggtttctgttttgcatggttagatcttctctct
cacaaatcctttatgccaaaacttttaattagacaacaaaaacaatggttccatgctcta
ttggttcaacactttaaattcttggaacctttccttcgtggtggtgacttaagtgaacct
gtacgtgttctctacaagggtactttgaaggtcctccttttactccttcatgacttccca
gagttcctctgtgaatatcatttcagtttatgtgatgtcattccaaatacttgtattcaa
cttcgtaatctcatcttatccgcctttccaagaaatatgagattaccagatcctttcact
ccaaacttaaagattgatatgttaccagatattaatcaaccaccaaaaatctcttcaaac
tttaccgcaagtcttaaaggtttaaaaattgaaattgataattacttcaagaatagaggt
ccatattctttcttgttggatttaaagaataaacatttactactcaccgataaagaggaa
atcttggctgctggcaccaaatacaatgtaccactcattaattcactcgttttatacatt
ggaacattggcaattccacaaattcaacgtaaatctggtgttgctccaacaccatcacaa
agtgctccaatggatattttccatcgtttggctttggatctcgatagtgaaggtcgttat
atctttttcaatgcaatcgccaatcaacttcgttatccaaataatcatacccattactta
agttgtgtaattttattcctcttctctgaatctggtcaagatattatcaaagaacaaatc
accagagtactcttggaaagattaattagtaataaaccacatccatggggtctattaatc
acttttatcgaattaattaaaaatttaagatataacttttggtctcatggtttcacaaaa
gttgctccagaaattgctcaattatttgattctgttgcaaaaagttgtttaaatagagaa
tcttcaaatttatctcaatag
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integrated database retrieval system
