Dictyostelium discoideum (cellular slime mold): DDB_G0276101
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Entry
DDB_G0276101 CDS
T00245
Symbol
smc3
Name
(RefSeq) structural maintenance of chromosome protein
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ddi03036
]
DDB_G0276101 (smc3)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ddi00535
]
DDB_G0276101 (smc3)
Chromosome and associated proteins [BR:
ddi03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
DDB_G0276101 (smc3)
Meiosis-specific proteins
Cohesin complex and associated proteins
DDB_G0276101 (smc3)
Proteoglycans [BR:
ddi00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
DDB_G0276101 (smc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_29
AAA_27
Motif
Other DBs
NCBI-GeneID:
8620317
NCBI-ProteinID:
XP_643274
dictyBase:
DDB_G0276101
UniProt:
Q552D9
LinkDB
All DBs
Position
2:complement(6321257..6325878)
Genome browser
AA seq
1437 aa
AA seq
DB search
MFIKFIFIKGFRSYKDQGFTSITLHPGFNVVTGRNGAGKSNLFAAIRFLLGDLNVGNNSE
DRLKLLHSYGGNTMQTGYVEIVFDNSDHRFPIDKTEFSLRRTFGTSKDEFSIGNNKLSKA
DVRNMFEAAGFSSSNPYYIVQQGKINTLALMKDSDRLDMLKEVAGATVYEERKRESVAIM
IESESKSIKIEEFLKYIDERIKVLDKERKELQLYQTQIEMKKQFEAYIIHLEANESNDRI
LDLEKEKEKYLIHSSKESKKLERFTDELKKDESKFNKLLSEIKKIDNEKIMVEKLNEVFD
KQKAQLVIQQKHFKKLLSKEQAKLEKLQKEQDLLSGSKEKLEKEIEIIKPKLEELIGQED
DIDNKLSSTERNLQELYVKQGMFQFKSKTERDKYLGDESSKLEDIVNQYEQQAQSLEEDV
EDMKQIQQSKGKQFDNSMASKDKEAEIVKTAELRVHELKLEKDQIEQRVSSTFQSINEMK
SNLTEHRNEWKKAERNLQTIMNRPLSEGLTRLNQIRQEGKIKGIHGPLVELFDIVEPEAT
LALEVVGGNGLFHVVVDTDDTASKILEILNTENIGRLSFIPLNRVRTKPPKFPILENDLV
CPLIKVISFDPIYTEAMKLVFGKTLICKDEATAEQVRKSSHVDCITFEGDVFHSKGAVTG
GYYSKKKLKLSSYQQIKHWRQQYQQLQTQLTEKESELEKLQASLLSIQKTIRTKEDEKNK
ILSNNDNSRVELDKIISERTMYIEILEKKQTILKKLKIDIQNCKDTIDGYQKQINTAFNT
KLTEEESNLLLTLSESSIQLKEQKISISSDVMKLQSRKNQMTNQLNQNYGKRLMEIEGEI
KSLNPENSKLQIELKQKEIDEINIEIDGVREKLESLVQSLNEKDAEIKPIKVSIDALKQQ
TSTIADQLVADGKKMESLLAQIQSFNKVRDAKQLRVLSKGDRFNFEELKKYNKDQSVEEL
NKINKSLASLRHVNQKANDQFNSFTNQYNSLEARRDELYESNASIQLLIKTLDNKKDEAI
ARTFSGVAKNFTQVFKELIPGGSAKLVMKRQMDEDEGEGEDPKEWADGETPKGLLTFTGI
GIQVSFGEGHEPCSMRQLSGGQKTLVALALIFALQRTDPAPFYLLDEIDAALDHNYRVAV
SKMIRKHSREIQFIATTFGPEFVMDANQNWIVVFNKGGSKLVPGSTEDALNVIKQLDNGS
AFDYSYQGITEEEFNQDRPVLGVAENKHLVAFEFKRAKKRALKALAKAEEACAIMVQDEA
NQDSNADSSEKLKHDKKIFEKLHKEYLLRAAEFNQVKERFIRFGGIIKQQGDDELSQSSQ
PQDKEMENIEKEKDNNQQTSDTEMKDTDQSTTKQKSPPKRKSPSQDTSDIETSDDESKKK
QTESNQEESDIDEETPSQRFEEALNYASQKLKQHGLQESEQSEQEEDDDDISSDSSD
NT seq
4314 nt
NT seq
+upstream
nt +downstream
nt
atgtttataaaattcatatttataaaaggttttagaagttataaagatcaaggttttaca
tctattacattacacccaggttttaatgttgttactggtagaaatggtgcaggtaaaagt
aatttatttgcagcaattagatttctattaggtgatcttaatgttggtaataattcagaa
gatagattaaaactattacacagttatggtggtaatacaatgcaaactggttatgtagag
attgtatttgataatagtgatcatagattccctattgataaaactgaattttcattacgt
agaacatttggtacatcaaaagatgaatttagtattggtaataataaattatctaaagca
gatgttagaaatatgtttgaagcagccggtttctcaagtagtaatccatactatatcgta
caacaaggtaaaatcaatacattagcattaatgaaagattctgatagattggatatgtta
aaagaggtagcaggtgcaaccgtttatgaagaacgtaagagagagtctgttgcaatcatg
atagagtctgagagtaaatcaataaagattgaagaatttctaaaatacattgatgaacgt
atcaaagtattagataaagaacgtaaagaattacaattatatcaaactcaaattgaaatg
aaaaaacaatttgaagcctatatcattcatttagaagcaaatgaatcaaatgatagaatt
ctagatcttgaaaaagaaaaagaaaaatatttaattcattcttcaaaagaatctaaaaaa
ttagaaagatttactgatgaattaaaaaaggatgaaagtaaatttaataaacttttaagt
gaaattaaaaaaattgataatgaaaaaattatggtagaaaaattaaatgaagtatttgat
aaacaaaaagcacaattagttatacaacaaaaacattttaaaaagttattatcaaaggaa
caagctaaattggaaaagttacaaaaggaacaagatttattgagtggtagtaaagagaaa
ttagagaaagagattgaaatcattaaaccaaaactagaggagttaataggccaagaggat
gatattgataataaattgtcaagtactgaaagaaatttacaagaattgtatgttaaacaa
ggtatgtttcaatttaaatcaaagacagagagagataaatatttgggtgatgaaagttca
aaacttgaggatatagttaaccaatatgaacaacaagctcaatcattggaggaggatgta
gaggatatgaaacaaattcagcaatcaaagggtaaacaatttgataatagtatggcttca
aaagataaagaagcagagattgtaaagacagcagaattgagagttcatgaattaaagttg
gagaaagatcaaattgaacaacgagtttcctcaactttccaatcgatcaatgaaatgaaa
tccaatctaacagagcatagaaatgaatggaagaaagcagaaagaaaccttcaaaccatt
atgaatcgtccattgagtgagggtttgacaagattgaatcaaattagacaagagggtaaa
atcaagggtattcatggtccattggttgaactctttgatatcgttgagccagaggcaact
ttagcattggaggttgtaggtggcaatggtttattccatgtggtggtcgacactgatgat
accgcctcaaagatattggagatcttaaacactgaaaacattggtcgtctttcattcatt
ccattgaatcgtgtaagaactaaaccaccaaaattcccaatactagagaatgatttagtt
tgtccattgattaaggtgatctcattcgatccaatctatacagaggcaatgaaattggta
tttggtaaaactttaatctgtaaagatgaagccacagctgaacaagttagaaaatcaagt
catgtcgattgtattacatttgaaggtgatgttttccattcaaaaggtgctgtaaccggt
ggttactatagtaaaaagaaattaaaactctctagttatcaacaaattaaacattggcgt
caacaatatcaacaacttcaaactcaattaactgagaaggaatctgaattggagaaactt
caagcatctcttttatccattcaaaaaaccattagaaccaaagaggatgaaaagaataaa
atcttatcaaacaatgataatagtagagtggaattggataaaatcatctctgaacgtact
atgtacattgaaattcttgagaagaaacaaaccatcttaaagaaattaaagattgatatt
caaaattgtaaagatactatcgatggttatcaaaaacaaatcaatacagcattcaatact
aaattaactgaagaagagagtaatttacttttaacattgagtgaatcatcgattcaatta
aaggaacaaaagatttcaatctcttcagacgttatgaaacttcaatctagaaagaatcaa
atgaccaatcaactcaatcaaaactatggtaaacgtttaatggaaatcgaaggtgagatt
aaatcacttaatcctgaaaactctaaattacaaattgaacttaaacaaaaggaaatcgat
gagatcaatatagagattgatggtgttcgtgagaaattagaatcattggttcaatcattg
aatgaaaaagacgctgaaattaaaccaattaaagtatcaatcgatgcattgaaacaacaa
acctctacaatcgctgatcaattggttgccgatggtaaaaagatggaatccctccttgca
caaattcaaagttttaataaagttagagatgctaaacagctaagagtactatcaaaaggt
gatagattcaattttgaagaattgaagaaatataataaagatcaatcagttgaagaatta
aataagatcaataaatcattggcttcattgagacatgtaaatcaaaaagcaaatgatcaa
ttcaatagttttacaaatcaatacaatagtttagaggcaagaagagatgaactttatgaa
tccaatgcttcaattcaattacttattaaaacacttgataataaaaaagatgaagctatc
gctagaacttttagtggtgtcgcaaagaatttcactcaagtatttaaagaattgattcca
ggtggcagtgctaaattagtaatgaaacgtcaaatggacgaagatgaaggcgagggtgaa
gatccaaaagaatgggccgatggtgaaactccaaaaggattattaaccttcactggtatt
ggtattcaagtttcatttggtgaaggtcatgaaccatgttcaatgagacaattaagtggt
ggtcaaaaaactttggtagctttggctttaattttcgcacttcaacgtactgatcctgct
ccattctatcttttagatgaaattgatgctgcactcgatcataactatagagtagccgta
tcaaagatgattcgtaaacattcaagagagattcaattcattgccactacttttggtcca
gagtttgtcatggatgctaatcaaaattggattgttgttttcaataaaggtggttctaag
ttagtaccaggttcaactgaagatgctcttaacgttattaaacaattggataatggtagt
gctttcgattactcttatcaaggtattacagaagaagagtttaatcaagatagaccagtt
ttgggtgttgctgaaaataaacatctcgtcgcatttgaatttaaacgtgctaaaaagagg
gctctcaaagctttggctaaagctgaagaggcctgcgctataatggttcaagatgaggct
aatcaagattcaaatgctgattcctctgaaaaacttaaacatgacaagaaaatatttgaa
aaacttcataaagaatatcttcttagagcagctgaatttaatcaagtaaaagagagattc
atacgttttggtggtatcattaagcaacaaggtgatgatgaattaagtcaatcaagtcaa
ccacaagataaagaaatggaaaatattgaaaaagaaaaagataataatcaacaaacttca
gatactgaaatgaaagatactgaccaatcaaccacaaaacaaaaatcaccaccaaaaaga
aaatcaccttctcaagatacttcagatattgaaacctctgacgatgaatcaaagaaaaaa
caaacagaatctaatcaagaggaatcagatattgatgaagaaactccatctcaacgtttc
gaagaggctttaaattatgcttcacaaaaattaaaacaacatggtttacaagaatctgaa
caatctgaacaagaagaagatgatgatgatatttcaagtgattcaagtgattaa
DBGET
integrated database retrieval system
