Dictyostelium discoideum (cellular slime mold): DDB_G0276283
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Entry
DDB_G0276283 CDS
T00245
Symbol
utp13
Name
(RefSeq) U3 small nucleolar ribonucleoprotein
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Pathway
ddi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
DDB_G0276283 (utp13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ddi03009
]
DDB_G0276283 (utp13)
Ribosome biogenesis [BR:
ddi03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
DDB_G0276283 (utp13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Utp13
Beta-prop_EML_2
EIF3I
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
NBCH_WD40
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_DCAF4
Beta-prop_RIG_2nd
Beta-prop_NUP159_NUP214
WDR90_beta-prop_4th
Beta-prop_Nup120_160
Beta-prop_SPT8
WD40_like
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_DCAF12
Intein_splicing
Beta-prop_IFT122_2nd
Beta-prop_NOL10_N
Ge1_WD40
Spike_JR1
RMC1_N
Utp12
Motif
Other DBs
NCBI-GeneID:
8620427
NCBI-ProteinID:
XP_643223
dictyBase:
DDB_G0276283
UniProt:
Q7KWS8
LinkDB
All DBs
Position
2:6600384..6603408
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AA seq
902 aa
AA seq
DB search
MIRYVECEPVTDDEEFQDEQPIQKVEPKAPSRKLKTVFKPDYEIGSLFTGGSLRISEDSK
FIVSQAGYEIKIIDTEHGTVISKIESDTKISTFALSPNNEEILIGCSNLQIKQYRIEDQS
LVKIWKGHEGPINEIDIHSSGNIVASASSDKTVKVWDLEKGYCTHNFQHDDVVTMLKFHP
TLLKLVTVCLDLNIRVYDLVTKECVILTNHLSQISGITFSNSGKELISSGRDKVLNVWDM
LSKNPKKTIPIYQELGGIITLPKESYNSLPENSKIKIEKIREKVKTMAAHADKIKNGDDI
TIVIGGEEVLRAWCTETGECIWNDQNIEFKKKTDNDDKDKTDTLYTISSIINNKDKIISI
TSEHNLLIYNGKTLERQGEIIGYNDEIIDIKYINDDNIIVATNSNEIKTYDLNTKRAQVL
RGHEDLVMSVDVSADGKHIISGSRDKSAMIWDLEKKESIAQLTGHTGVISCVALPKKPST
SMFAITASDDRTIKLWKGFSTTSSSGGDDSKKKDKKISASVTKIAHEKDINSISIAPNDK
IFATASQDSYVKLWNVNNLEPITSIKAHRRGVWHVEFSPIDQCFLTCSADGTIKIWSLSD
YTCLKTLEGHKGSVLKASFISFGMQIVSVASEGLIKLWNIKTNECLNTFEGHESKIWALS
VAKDQERFITGGSDSKLIAWKDHTEIELEIQKKKEENQVLYKQHLDTAIRKKDYYSALKL
ALVLDQPRQTLNIFNSMYYDDQSIGESVIQGCIGRLSPNEVVKCLRFIRDWNTNSKFVSI
SQIVLNSIITSFKPDELSKLSVGEMPKLLESIIPYTDRHFQRIDKMLQKTYLIDFTIQSI
NPAASTLSMDRVETSHIDQNYKKSLDQLIKEPTKPMKKSIQTPTSQKKKEKKKTFFKSNA
NK
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atgataagatatgttgaatgtgaaccagtaacagatgatgaagaatttcaagatgaacaa
ccaattcaaaaagttgaaccaaaagcaccatcaagaaaattaaaaactgttttcaaacca
gattatgaaattggatcattatttacaggtggttcattaagaatttctgaagattcaaaa
tttattgtatcacaagccggttatgaaattaaaattattgatacagagcatggtactgta
atttcaaaaattgaaagtgatacaaaaatatcaacatttgcacttagcccaaataatgaa
gagattttaataggttgttcaaatttacaaataaaacaatatagaattgaggatcaatca
ttagttaaaatttggaaaggacatgaaggtccaatcaatgaaattgatattcattcaagt
ggaaatatagttgcatcagcatcatcagataaaaccgttaaagtttgggatttagaaaaa
ggttattgtactcataactttcaacatgatgatgttgtaacaatgttaaaatttcatcca
actttattaaaattagttactgtttgtttagatttaaatattagagtttatgatttagtt
acaaaagaatgtgttattttaacaaatcatttatcacaaatttcaggtattacattttca
aatagtggtaaagaattaatttcatcaggtagagataaagtattgaatgtttgggatatg
ctatcaaagaatccaaagaaaacaattccaatctatcaagaattaggtggaataattaca
ttaccaaaggaatcatataattcattaccagaaaatagtaaaattaaaattgaaaagatt
agagaaaaagttaaaacaatggcagcacatgctgataaaattaaaaatggtgatgatatt
acaattgtaattggtggtgaagaagttttaagagcatggtgtacagaaactggtgaatgt
atttggaatgatcaaaatattgaatttaaaaagaaaactgataatgatgataaagataaa
actgatactttatatacaatttcttcaattattaataataaagataaaattataagtata
acatcggaacataatttattaatttataatggtaaaacattagaaagacaaggtgagatt
attggatataatgatgaaattattgatattaaatatattaatgatgataatattattgtt
gcaaccaattcaaatgaaattaaaacttatgatttaaatacaaagagagcacaagttttg
agaggtcatgaagatttagttatgtcagttgatgtaagtgccgatggtaaacatattatt
tcaggttcaagagataagagtgcaatgatttgggatttggaaaagaaagaatcaattgct
caattgacaggtcatactggtgttatttcatgtgttgcattaccaaagaaaccttcaact
tcaatgtttgcaattacagcatcagatgatcgtacaattaaattatggaaaggtttttca
acaacatcatcatctggcggcgatgacagcaagaaaaaagataaaaaaatttcagcatca
gttacaaagattgcacatgaaaaagatataaattcaatttcaattgcaccaaatgataaa
atctttgcaactgcatcacaagattcatatgtaaaattatggaatgtaaataatttggaa
ccaattacatcaattaaagcacatcgtagaggtgtatggcatgttgaattctcaccaatt
gatcaatgctttttaacttgttccgctgatggtacaattaagatttggtcactttcagat
tatacatgtttaaagacattggaaggtcataaaggttcagtattaaaagcatcattcatt
agtttcggtatgcaaatcgtatcggttgcatctgagggtttaattaaactttggaatatt
aaaaccaatgaatgtttaaatacttttgaaggtcatgaatcaaagatttgggcattatca
gttgcaaaagatcaagaacgtttcattactggtggttcagattcaaaacttatcgcttgg
aaagatcatactgaaatcgaattggaaattcaaaagaagaaagaagagaaccaagtttta
tataaacaacatttagatacagccattagaaagaaagattattatagtgctttgaaatta
gcattggtattggatcaaccaagacaaactttaaatatttttaactcaatgtactatgat
gatcaatccattggtgaatctgttattcaaggttgtattggtcgtttatcaccaaatgaa
gttgtaaaatgtttacgttttattcgtgattggaatacaaattcaaagtttgtttcaatc
tctcaaatcgttttaaattcaattatcacatcctttaaaccagatgaactttcaaaatta
tctgttggtgaaatgccaaaacttttagaatcaattataccttacactgatagacatttc
caaagaattgataaaatgttacaaaaaacttatctaatcgattttacaattcaatcaatt
aatcctgctgcaagtactctctcaatggatcgtgttgaaacttcacatattgatcaaaat
tataaaaaatctttagatcaattaattaaagaaccaactaaaccaatgaaaaaatcaatt
caaactccaacaagtcaaaagaaaaaagaaaaaaagaaaacttttttcaaatcaaatgca
aataaataa
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