Dictyostelium discoideum (cellular slime mold): DDB_G0276803
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Entry
DDB_G0276803 CDS
T00245
Symbol
prp19
Name
(RefSeq) WD40 repeat-containing protein
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Pathway
ddi03040
Spliceosome
ddi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
DDB_G0276803 (prp19)
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
DDB_G0276803 (prp19)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ddi03041
]
DDB_G0276803 (prp19)
04121 Ubiquitin system [BR:
ddi04121
]
DDB_G0276803 (prp19)
03400 DNA repair and recombination proteins [BR:
ddi03400
]
DDB_G0276803 (prp19)
Enzymes [BR:
ddi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
DDB_G0276803 (prp19)
Spliceosome [BR:
ddi03041
]
Complex B
Other components
Prp19 complex
DDB_G0276803 (prp19)
Complex C
Prp19-CDC5 complex
DDB_G0276803 (prp19)
Ubiquitin system [BR:
ddi04121
]
Ubiquitin ligases (E3)
U-box type E3
DDB_G0276803 (prp19)
DNA repair and recombination proteins [BR:
ddi03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
DDB_G0276803 (prp19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Prp19
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
EIF3I
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_LRRK2
zf-Nse
WDR90_beta-prop_4th
Dehydrin
PRC2_EED_ins
Beta-prop_NOL10_N
Beta-prop_IFT140_2nd
WDR54
BofC_C
Motif
Other DBs
NCBI-GeneID:
8620756
NCBI-ProteinID:
XP_642890
dictyBase:
DDB_G0276803
UniProt:
Q7KWK5
LinkDB
All DBs
Position
2:complement(7360384..7362414)
Genome browser
AA seq
514 aa
AA seq
DB search
MICAISGSTTEEPVISTKTGNVYEKRLIEKYIDTNGKEPTTGEPLGLSDLITVKIGKTVK
PRPTTATSIPSMLQLFQNEWDSLMLETFTLKQQHETVRQELAHSMYQYDAACRVIARLVK
ERDAARSALANARNIVQQQQQQTNNNNNNNNNKDVEMSSASTPSSSEDNLLDSTIYKRIA
EKSEELIKTRKERTHQSLAEPDAIKQFKVSANVETDCQIKSLEVNSQDNNLIAMGGINGN
VYVYSRETNELCTAIKGTSSAPINKVLFAPNNTIVSAGSDAVIRVVKGGESPSKKTYTQY
KSTYQFAHKASVTDISLHVLGDYIISSSLDKSLNMYDIVNGTHLTSFGQSQQLCYTSVAF
HPDGMFFAAGTQNGVVKIFDLKSKVNSFNFQGLSTAVNCISFSENGYYLTAADNNTVKLF
DLRKAATKNSPDIQTITLDNQQIKSINFDYSSQYLGVASSNQINLYSCKSKQKPPISSIH
SIDSDCLDFKWARPNSNFFVTSSSSKNIVNIFSN
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgatatgtgcaatttcgggttcaacaacagaagaaccagtaatttcaacaaaaactgga
aatgtttatgaaaaaagattgattgaaaaatatatagatacaaatggtaaagagccaaca
accggtgaaccattaggtttgagtgatttaatcactgtaaagattggaaaaacagtaaag
ccaagaccaaccactgccactagtattccaagtatgttgcaattgtttcaaaatgaatgg
gattctttaatgttggaaaccttcacattgaaacaacaacatgaaactgttcgtcaagag
ttggcacattcaatgtatcaatatgatgctgcctgtagagtaatcgctagattagttaaa
gaaagagatgctgcaagatctgctttagcaaacgctcgtaatatagtacaacaacaacaa
caacaaacaaataacaacaacaacaacaacaataataaagatgttgaaatgtcatcagca
tcaacaccatcatcatcagaagataatttattagactcaacaatttataagagaattgct
gaaaaatctgaagaattaattaaaactagaaaagaaagaactcatcaaagtttagcagaa
ccagatgctattaaacaatttaaagtctctgccaatgttgaaactgattgtcaaattaag
agcttggaagtaaacagccaagacaataatttgatagcaatgggtggtatcaatggtaat
gtctacgtttattcacgtgaaaccaatgaactttgtacagctattaaaggaacaagttct
gcaccaataaataaagtattgtttgctccaaacaataccatagtttcagcaggctccgat
gcagtgatcagagttgtaaaaggtggtgaaagtccatctaaaaagacctacactcaatat
aaatccacttatcaattcgcccataaagctagtgtcaccgatatatcgttacatgtattg
ggagattatataatttcatcttcactcgataaatcattgaatatgtacgatattgtcaat
ggaactcatttgactagctttggtcaatctcaacaactttgttacactagtgtcgccttc
cacccagatggtatgtttttcgcagccggtactcaaaatggtgtggtcaaaatctttgat
ctcaagagtaaagtaaacagtttcaactttcaaggtctttcaaccgctgtcaattgtatc
tccttctctgagaatggttactatttaaccgcagccgataataacactgtgaaattattt
gatcttcgtaaagctgccactaaaaactcaccagatattcaaaccatcactttggataat
caacaaattaaatctatcaatttcgattactctagccaatatcttggtgtagcatcttcc
aatcaaatcaatctttacagttgcaaatcaaaacaaaaaccaccaatctcttctattcat
tcaattgattcagattgtttagactttaaatgggcaagaccaaattcaaatttctttgta
acttcttcctcttctaaaaatattgtcaatatcttttccaactaa
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