Dictyostelium discoideum (cellular slime mold): DDB_G0277221
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Entry
DDB_G0277221 CDS
T00245
Symbol
chcA
Name
(RefSeq) clathrin heavy chain
KO
K04646
clathrin heavy chain
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Pathway
ddi04142
Lysosome
ddi04144
Endocytosis
ddi05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
DDB_G0277221 (chcA)
04142 Lysosome
DDB_G0277221 (chcA)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
DDB_G0277221 (chcA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ddi04131
]
DDB_G0277221 (chcA)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ddi04147
]
DDB_G0277221 (chcA)
Membrane trafficking [BR:
ddi04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
DDB_G0277221 (chcA)
Exosome [BR:
ddi04147
]
Exosomal proteins
Proteins found in most exosomes
DDB_G0277221 (chcA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
SirC_C
HCNGP
Motif
Other DBs
NCBI-GeneID:
8620910
NCBI-ProteinID:
XP_642717
dictyBase:
DDB_G0277221
UniProt:
P25870
LinkDB
All DBs
Position
2:7717198..7722630
Genome browser
AA seq
1694 aa
AA seq
DB search
MTNLPIRFQEVLQLTNLGIGSNSIGFSTLTMESEKYICIRETTPDDKNNVVIIDTDNPSQ
ILRKQMKTDAAIMNPKEPILALKIGQVLQLISIEQKMQLKSCQMQEPLEFWKWISPNTLA
LVTATSVFHWTKEGNSDPVKVFDRHPDLQNTEIINYRSDSTQNWLVLVAIHQRDGRVVGR
IQLYSVEKQISQSIEGHAACFANYIVPGATRPSTLFAISSRTQNASKILVLEVSKGDGPN
FQKRASDVFYPPEIGASDFPVAMQVSEKYEVIYMVTKLGYIHLFDLGTANLIYRNRISNE
NIFVTAFEESTNGIIAVNRKGQVLSVSIDDKNIIPYICNTLNNLELAISMACKNNLPGAE
GLLTTQFERYFQQGQYKEAAKVAADSPGSILRNLQTIQKFQSIPPIPDQPSALLQYFGML
LEKGKLNKVESLELVRPVLAQGKKPILEKWLTEDKLECSEQLGDEVRPHDRKLALSIYYR
ANASDKVITLFAETGEFDKIIAYCKKFNYKPDFMFLLQRMANANPMGAADFAVKLVKEEG
GPYIDANQVVELFSARNMIQETSNFLFAILDGDRPQDANLQTKLLEINLLHAPQNADAIM
GGQKFTHYNRLRIGGLCEKAGLYQRALEHYTDLADIKRVLSHAGHMVNQEFLVSYFGSLN
PEDRMECMRDFLRTNPRQNLQLVVAIAVSYSDQITPEAIIAMFESFRLYEGLYLYLTQVV
VTSTSPEVHFKYIEAAAKINQFKEVERMCRDSNYYDPEKTRDFLKEAKLPDQLPLIIVCD
RYEFISDLTNYLYKNNLSKYIEAYVQKINPVNTPLVVGALLDLDCQEDYLRNLIMSVRNM
CPADSLVEQVEKRNRLKLLLPWLEARVAEGNIEPAIHNALAKIYIDSNKNPEAFLLHNQF
YDSKVVGKYCEKRDPYLSFVAYKRGLCDYELIEVTNKNTLFKNQARYLVERQDPDLWAYV
LSDQNEYKRSLIDQVVQTALPESTNATEVSATVKAFMDANLPNELIELLEKIVLEGKEFK
TAKELQNLLILTAIRADKSRVTDYINRLDNFDGSKLAPIAIESQLYEEAFFMYKKFQFNV
EAIDVLITHIGSIERAHDFAERCNQTEVYSKLGVAQLKAEMVKECIESFIKANDTEHYQE
VVAAAERKDEYEDLVKFLQMCRKKIKEPAIESELIFAYAKVNKLAEMEDFINSPNSAHIQ
VVGDRCFENGLYEAAKVLYTNISNFSRLTSCLVKLGQYQAAVDAARKANSTKTWKEVSAA
CIDAKEFRLAQVCGINIIVHGDELEELIRQYEDRGYFNELISLLESGLASERAHVGMFTE
LAILYSKYKEEKLMEHLKLFYSRLNVPKVIKACQANQQWPQLTYLYIHYDEHDNAIQTMI
NHSIEAWDHVLFKETIPKVAKLDLYYSAISFYLEEQPLLINDLLSVLSPRIDHTRAVTLI
RSLGHLPLVKPYLVSAQDQNVAALNEALNELYVEEEDYESLRSSIDANSNFGTIALAQKL
EKHELLEFRRIAAYLYKKNNRWAQSVELSKKDKLYKDAIQSASDSKNPAIGEELLQYFVD
QQNNSAFAACLYTCYDFLKPDAVIELAWRNNILNYSFPYLIQYVKEYTTKVDQLVDDFKA
RQKKTEEEKEQQNIESSQYQPDLTNLSYGYAATGGMLALPPAVGYQQQQQPQQMYNPNQM
MGGFQQNYNQYGGF
NT seq
5085 nt
NT seq
+upstream
nt +downstream
nt
atgaccaatttaccaattagatttcaagaagttctccaacttacaaatttaggtattgga
tccaattcaattggtttttcaaccttaacaatggagagtgaaaaatacatttgtattcgt
gaaactacaccagatgataaaaataatgttgtaattattgatactgacaatccatcacaa
attcttagaaaacaaatgaaaacagatgctgcaattatgaatccaaaagaaccaatttta
gcattaaaaattggacaagttttacaattaatttcaattgaacaaaaaatgcaattaaaa
tcatgtcaaatgcaagaaccattagaattttggaaatggatatcaccaaatacattagca
ttagttacagcaacatctgtatttcattggacaaaagaaggtaattcagatccagttaaa
gtttttgatcgtcatccagatttacaaaatacagagattataaactatcgttcagatagc
acacaaaattggttagttttagtagcaattcatcaaagagatggacgtgtagttggtcgt
attcaattatactctgtagagaaacaaatcagtcaatccattgaaggtcatgcagcatgt
tttgccaactacattgtaccaggtgcaactagaccatcaacattgtttgcaatttcatca
cgtactcaaaatgcatcaaagatattggtattggaggttagtaaaggtgatggaccaaac
ttccaaaaacgtgcctctgacgttttctacccaccagagattggtgcttccgatttccca
gtggcaatgcaagtctctgaaaagtatgaagtcatctatatggtcactaaattgggttac
attcatctctttgatttgggtacagcaaatctcatctacagaaatcgtattagcaatgaa
aatatatttgtaactgctttcgaagagagcaccaacggtatcattgccgtcaatagaaag
ggtcaagtcttatcggtttcaatcgatgacaaaaacatcattccatacatttgcaataca
ctcaacaatttagagttggccatttcaatggcttgtaaaaacaatttaccaggtgctgaa
ggtttactcaccactcaattcgaacgttatttccaacaaggtcaatataaagaggccgcc
aaagttgctgcagattcacctggctctatcttgcgtaaccttcaaaccattcaaaagttc
caatccattccaccaattccagatcaaccatctgctctccttcaatactttggtatgtta
ttagaaaagggtaaactcaataaagttgaatccctcgaattggttcgtccagttttagct
caaggtaaaaaaccaatccttgagaaatggttaactgaagacaaattagaatgttccgaa
caattgggtgatgaagttcgtccacatgatcgtaaattagcactttcaatctattatcgt
gcaaatgcctctgataaagtgatcactttattcgctgaaactggtgaattcgacaaaatc
atcgcctactgtaagaaattcaattataaaccagactttatgttcttacttcaacgtatg
gcaaatgctaatccaatgggtgccgcagatttcgccgttaaattggttaaagaagaaggt
ggtccatacattgatgccaatcaagtcgttgaacttttctctgctcgtaatatgattcaa
gaaactagtaacttcctctttgccattctcgatggtgatcgtccacaagatgcaaacctt
caaaccaaactcttggagatcaatctcttacatgcaccacaaaacgccgatgccattatg
ggtggtcaaaagtttacacattacaatcgtcttagaatcggtggtctttgcgaaaaagct
ggtctctatcaacgtgccctcgaacattacactgatctcgccgatattaaaagagtttta
tctcatgctggtcatatggtgaatcaagagtttttggttagttattttggttccctcaat
ccagaggatcgtatggaatgtatgcgtgatttccttcgtaccaacccacgtcaaaatctt
caattggttgttgcaatcgccgtttcatacagtgaccaaatcactccagaagcaatcatt
gccatgtttgaatctttccgtctctatgagggtctttatctctacttaactcaagtcgtc
gtaaccagtacctcaccagaggttcattttaaatacattgaagccgccgctaaaatcaat
caattcaaagaggtcgaacgtatgtgtcgtgattcaaactactatgatccagaaaagact
cgtgactttttaaaggaagctaaattaccagatcaattaccattgatcattgtttgtgat
cgttacgaattcatctctgatcttaccaactatctctacaaaaacaatctctccaaatat
atcgaagcctacgttcaaaagattaatccagtcaatacaccattggttgtaggtgcactt
ttggatttagattgtcaagaggactatttacgtaatctcattatgagtgttagaaatatg
tgtccagccgattctttagttgaacaagttgaaaagagaaatcgtttgaaacttttactt
ccatggttagaggcaagagttgccgaaggtaacattgaaccagccattcacaacgctttg
gccaagatttacattgattccaataagaatccagaagctttcctcttacacaatcaattc
tatgatagtaaagtcgttggtaaatattgtgaaaaacgtgatccatacctttcattcgtt
gcctacaaacgtggtttatgtgattatgaattgattgaagtcaccaataagaataccctc
ttcaagaatcaagcacgttatcttgttgaacgtcaagatccagatctttgggcttacgtt
ttatccgatcaaaatgaatacaagagatctctcattgatcaagtcgttcaaaccgctctc
ccagaatcaaccaatgccaccgaagtttctgcaactgtcaaggctttcatggatgcaaac
ttaccaaatgaattgattgaattacttgaaaagattgttctcgaaggtaaagaattcaaa
actgccaaagaactccaaaatcttttaattctcactgctattcgtgccgacaagagtcgt
gtcactgattacattaatcgtttagataactttgatggttcaaaattagcaccaatcgcc
attgaatctcaactctacgaagaagccttctttatgtacaagaaattccaattcaatgtt
gaagctatcgatgttttaatcactcatattggttcaattgaaagagctcatgatttcgct
gaacgttgtaatcaaaccgaggtttacagtaaattgggtgttgctcaattgaaagcagaa
atggtcaaagaatgtattgaatcattcattaaagccaatgatactgaacattatcaagag
gttgtcgctgccgctgaaagaaaagatgaatatgaagatttggttaaattccttcaaatg
tgtcgtaagaagattaaagaaccagccattgaaagtgaattgatctttgcttatgctaaa
gttaacaaattggccgaaatggaagatttcatcaactcaccaaactctgctcacattcaa
gtcgttggtgatcgttgtttcgaaaatggtctctatgaagctgccaaagtactctatacc
aatatttccaacttttcacgtcttaccagttgtctcgtcaaattaggtcaatatcaagct
gccgtcgatgctgcacgtaaagccaactccaccaaaacttggaaagaagttagtgctgct
tgcatcgatgccaaggaattccgtttggcacaagtttgtggtatcaatatcattgtacat
ggtgatgaacttgaagaattaattcgtcaatatgaagatcgtggttatttcaatgaatta
atttccctcttagagagtggtcttgcctctgaacgtgctcatgttggtatgttcaccgaa
ttggctattctctactctaaatacaaagaggagaaattaatggaacacttaaaacttttc
tacagtcgtctcaatgttccaaaggttatcaaagcttgtcaagccaatcaacaatggcca
caactcacctacttatacattcattacgatgaacatgataatgccattcaaaccatgatc
aatcattccattgaagcttgggatcatgttctctttaaagaaaccattccaaaggttgcc
aaattggatctctactatagcgccatctcattctatttagaggaacaaccattactcatc
aatgatctcttatcggttttatcaccacgtatcgatcatactcgtgccgtcactttaatt
cgttcattaggtcatctcccattggttaagccatacttggtatctgctcaagatcaaaat
gtagccgctctcaatgaagctctcaatgaattatacgtcgaagaagaggattatgaatcc
ttgagatcctcaatcgatgccaactccaactttggcaccattgctctcgctcaaaaactt
gaaaaacatgaactcctcgaattccgtagaatcgccgcctatttgtacaaaaagaataat
cgttgggctcaatcagttgaactctctaaaaaagataaactctacaaagatgccattcaa
tctgcctcagactcaaagaatccagccattggcgaagaacttttacaatactttgttgat
caacaaaataatagtgcctttgctgcttgtctttacacttgttacgactttttgaaacca
gatgctgtcatcgaattggcttggagaaataatatcctcaattactcattcccatatctc
attcaatacgttaaagaatatacaaccaaagttgatcaattggtcgatgatttcaaagct
cgtcaaaagaaaactgaagaagaaaaagaacaacaaaatattgaatcctctcaatatcaa
ccagatcttactaacctctcatatggttacgcagccactggtggtatgttagctcttcca
ccagctgtaggatatcaacaacaacaacaaccacaacaaatgtataatccaaatcaaatg
atgggtggtttccaacaaaattataatcaatatggtggtttttaa
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integrated database retrieval system
