Dictyostelium discoideum (cellular slime mold): DDB_G0277257
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Entry
DDB_G0277257 CDS
T00245
Name
(RefSeq) hypothetical protein
KO
K14299
nucleoporin SEH1
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Pathway
ddi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
DDB_G0277257
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ddi03019
]
DDB_G0277257
04131 Membrane trafficking [BR:
ddi04131
]
DDB_G0277257
Messenger RNA biogenesis [BR:
ddi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
DDB_G0277257
Membrane trafficking [BR:
ddi04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
DDB_G0277257
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
WD40_MABP1-WDR62_2nd
WDR55
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_Vps41
Beta-prop_IFT140_1st
EIF3I
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR75_1st
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
Beta-prop_SCAP
Beta-prop_IP5PC_F
ASA1
Beta-prop_Nup120_160
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
8620954
NCBI-ProteinID:
XP_642765
dictyBase:
DDB_G0277257
UniProt:
Q86K39
Structure
PDB
PDBj
LinkDB
All DBs
Position
2:complement(<7833225..>7834846)
Genome browser
AA seq
467 aa
AA seq
DB search
MRVFHRLSTAHDDLIHDVSYDFYGKRLATCSSDQKIKVWDQNDNQKWELSAEWKAHSGSV
WKLAWAHPEYGQVIASCSFDRTVCIWEESEDEKGQKKWQLKAHLVDSRDSVTDIKFAPKS
FGLRLATCSSDGYIRIYEAMDIMNLSQWTIVEEFESQKGTSNCISWNPSSYDKPMIAVGS
NEPYIKIWEYSETARKWLQIDTLTAYPIGSTISSSNLNSGGGIGGGIGSGIGGGIGGGIG
GAGGSIGGVSGVNNSSMGNLGSGIGNNINNSNINNISVGVGSGVGGGVGSGVGGSLNNGL
NSAQGNSIGNGNIGSLNNISGNSGGLNSNSLMSGANSSINVSSGNNSIYSNNNFDSSSDG
GSRAIHDVCWAPNMGRSYHLIATASKDHKVRIWKLSSDKSKMELKEVMRKDDHKSEVWRV
EWNITGTILASSGDDGNVCLWKCNMNGEWKLFSLISGEESTEDKYDR
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgagagtatttcatagactttcaacagcacatgatgatttaatacatgatgttagttat
gatttttatggtaaaagattagcaacatgctcatcagatcaaaagattaaagtttgggat
caaaatgacaatcaaaaatgggaattatcagcagaatggaaagcacattcaggttccgtt
tggaaattagcatgggcacatcctgaatatggtcaagtaattgcatcatgttcatttgat
agaacagtttgtatttgggaagaaagtgaagatgaaaaaggtcaaaaaaaatggcaattg
aaagcccatcttgttgatagtagagattcagttacagatattaaatttgcaccaaaatca
tttggattaagattagcaacatgttcatcagatggatatattagaatctatgaagctatg
gatataatgaatttatcacaatggacaatcgttgaagaatttgaatcacaaaaaggtact
agcaattgtatctcttggaatccaagttcatatgataaaccaatgattgcagttggttca
aatgaaccatatataaagatttgggagtatagtgaaactgctagaaaatggcttcaaata
gatacattaactgcatatccaattggttcaaccatttcaagtagtaatttaaatagtggt
ggtggtattggtggtggtattggtagtggtatcggtggtggtattggtggtggtatcggt
ggtgctggcggtagtattggtggtgtcagtggtgtaaataatagtagtatgggtaattta
ggtagtggtattggaaataatattaacaatagcaatatcaataatatctctgttggtgtt
ggtagtggtgttggtggtggtgttggtagtggtgttggtggttcattaaataatggttta
aatagtgctcaaggtaatagtataggtaatggtaacattggtagtttaaataatatcagt
ggcaatagtggtggtctcaatagcaacagtttaatgagtggtgctaatagtagcatcaat
gtttcaagtggtaataatagtatctactctaataataatttcgattcttcttctgatggt
ggtagtagagctatacatgatgtttgttgggccccaaatatgggaagatcttatcattta
attgcaacagcatcaaaagatcataaagttagaatatggaaactcagtagtgataaatca
aagatggaattaaaagaggtaatgcgtaaggatgatcataaatccgaagtctggcgtgtt
gaatggaatatcactggtacaatcttggcttcatccggtgatgatggtaatgtttgtctt
tggaaatgtaatatgaatggtgaatggaaattattctcattaattagtggtgaagaaagc
acagaagataaatatgacagataa
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