Dictyostelium discoideum (cellular slime mold): DDB_G0277375
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Entry
DDB_G0277375 CDS
T00245
Name
(RefSeq) C2H2-type zinc finger-containing protein
KO
K27103
serrate RNA effector molecule
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ddi03019
]
DDB_G0277375
Messenger RNA biogenesis [BR:
ddi03019
]
Eukaryotic type
mRNA processing factors
Other processing factors
DDB_G0277375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SERRATE_Ars2_N
ARS2
DUF4187
RRM_1
Motif
Other DBs
NCBI-GeneID:
8620984
NCBI-ProteinID:
XP_642791
dictyBase:
DDB_G0277375
UniProt:
Q54ZS5
LinkDB
All DBs
Position
2:complement(7905630..7909062)
Genome browser
AA seq
1068 aa
AA seq
DB search
MEQEEAVDEFGRPLRPNRDSSSDSDSDRDYDNRYRKRRDDSRERDYERYSPDRYSRRGDH
SPERRRRSPSPYRGRGRGRDDWDGGNNNNNNNNNNNNNNNNNNNNNNNNISSSNNSNGYR
GNRNGFPSSMVVDNNSNNNINNNNINNNNNNNNENNNNNTNGMTTSTSTSISSPSTIPSG
SAKGLIGGPKRAQKRGDIFEGGYFRSYKQFLDYQDDSITPIEADKKYEEYKIEYSKRQSR
VFFKEHQQEEWFKEKYDPFFLAKKRKEKVEKSKSFIQTFALNLNDENHKFSLESKDNIKE
GDKLDLDGLDMHHHHHPHINNEDNSNNINNTSTTTNNTNNTTTITTTSATGEEVSESSSS
SSSSSSSSSSSSSSSSSSTTTETEEKSNNNNTNNNNNSNTNNNNNNNISTSITSINKSNI
NDKEKSTLFIKAVSPTCTKEELLEVLNKVGNGEICVTKLTLSEPVRYKNFYRLGWVTFKN
AELASKALKELNGHKMRDFDLYLNINKPSEDAERRFKITPNIASTENRITIDLEQSTTLM
KLFDENKGITNNPINSFEKWDSLTNIERLDRTILYLRYVHFYCYYCSEEFSDECETTRKC
GTIHLRRTQGEQTSIINNNNNINNNNTAIQSSSSSSSSSITTSTTATTTTKTTENNKEEQ
EEEQDKIKEDKEEEEDKIQEDKPEKVEEENQDKIKEDKPEKVDEDKEMEDDETTTKTTTT
NNTTSATTTTTTTSMEIDNKQPKLTTESEMLWVTSLDNNTKNKINKIPTSEEQYTCKESI
EKAAEEYIATNTIKIEEEKFKCSLCSKLFRGAEFVKKHINLKHPEDLQKESEAKGTEEQF
FLNYFSDPRRITPLPPQSQNQNQMVFGGYGPSAPGGTGLGRGGHPPGTATQMLTPRTRFN
PAIGQWETVVVPMIIPGMIPNQGMVQIMSPVFASPNNMRGRPGGANGTATGGGGGGSGNG
GPIPPHMVGGPVPMRRSYGGPTGNLSPNSSSNGGGSGGRYGSGPPGMDGGPPQSMRYRPY
PTQPSRHSTSSMDPRGIREYVDLDAPIDHVPEIDYRSALKEYQNKKSL
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atggaacaagaagaagcagttgatgaatttggtagaccattaagaccaaatagagatagt
tcgtccgatagtgatagtgatagggattatgataatagatatagaaagagaagagatgat
agtagagagagagactatgaaagatattcaccagatagatattcaagaagaggtgatcat
tcacctgaaagaagaagaagatcaccttcaccatatagaggtagaggtagaggtagagat
gattgggatggtggtaataataataataacaataataataataataacaacaacaataat
aataacaataataataacaataataatattagtagtagtaataatagtaacgggtataga
ggtaatagaaatgggttcccttcgtcaatggttgtagataataatagtaataataatatt
aataataacaatattaataataataataataataataatgaaaataataataataatact
aatggaatgacaacatcaacatcaacatcaatatcaagtccatcaacaattccaagtgga
tcagcaaaaggattaataggtggaccaaagagggcacaaaagagaggagatatttttgaa
ggtggttattttagatcttataaacagtttttagattatcaagatgattcaatcacacca
attgaagcagataaaaaatatgaagaatataaaattgaatactcaaagagacaatctaga
gtattctttaaggagcatcaacaagaagaatggtttaaagaaaaatatgatcctttcttt
ttagcaaagaaaagaaaagaaaaagttgaaaaatcaaaatcatttattcaaacttttgct
ttaaatttaaatgatgaaaatcataaattttcattagagtcaaaggataatattaaagaa
ggtgataaattagatttagatggtttagatatgcatcatcatcatcatcctcatataaat
aatgaggataatagtaacaatataaataatacatcaaccacaaccaataatacaaataat
actacaactataacaacaacttcagcaacaggtgaagaagttagtgaatcatcatcatca
tcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatctacaaca
acagaaacagaagaaaagagtaataataataatactaacaacaataataatagcaatacc
aataacaacaacaataataatatatcaactagcataacatctataaataaatctaatatt
aatgataaagaaaaatcaacattatttattaaagcagtatcacctacttgtacaaaagaa
gaattattggaagttttaaataaagttggaaatggtgaaatttgtgttacaaagttaaca
ttaagtgaaccagttagatataaaaacttttatcgtttaggttgggtaacttttaaaaat
gctgaactcgcttcaaaagcattaaaagaattaaatggtcataagatgagagatttcgat
ttatatttaaatattaataaaccatcagaagatgcagaaagaagatttaagattacacca
aatattgcatcaacagagaatagaataactattgatttagaacaatcaacaacattgatg
aaattatttgatgaaaataaaggtatcacaaataatccaatcaattcattcgagaaatgg
gattcattaacaaatattgaacgtttagatagaactatactctatcttagatatgttcat
ttttattgttattattgttctgaggaatttagtgatgaatgtgaaaccactagaaaatgt
ggtaccattcatttaagaagaacacagggtgaacaaacttcaatcattaataataataat
aatattaataataataacacagctattcaatcatcatcatcatcatcatcatcatcaatt
accacatcaacaacagcaactacaacaacaaaaacaacagaaaataataaagaagaacaa
gaagaagaacaagataaaataaaagaagataaagaagaagaagaagataaaatacaagag
gataaacctgaaaaagtagaagaagaaaatcaagataaaataaaagaagataaacctgaa
aaagtagatgaagataaagaaatggaggatgatgaaacaacaacaaaaacaacaacaaca
aataatactacatcagcaacaacaacaacaacaacaacatcaatggaaattgataataaa
caaccaaaattaacaacagaaagtgaaatgttatgggtaacatctttggataataataca
aagaataagattaataagattccaacatcagaagaacaatatacttgtaaggaatcaatt
gaaaaggcggctgaagaatatattgccaccaataccataaagattgaagaggagaaattt
aaatgtagtttatgttcaaaattatttagaggtgcagagtttgtaaagaaacatatcaat
ctaaagcatcctgaagatttacaaaaggaatcggaagcaaaaggaacagaggaacaattc
tttttaaattatttctctgatccacgtcgtatcacaccactaccaccgcaaagtcaaaat
caaaatcaaatggttttcggtggttacggacctagtgctccaggtggtacaggcttaggt
agaggtggtcatccacctggtactgccactcaaatgttaacaccaagaactagatttaat
cctgccattggtcaatgggaaactgtggtggttccaatgatcattccaggtatgattcca
aatcaaggtatggttcaaattatgtcaccagttttcgcctcaccaaataatatgcgtggt
agacctggtggtgcaaatggcactgccactggtggtggcggcggcggtagtggcaacgga
ggtccaatccctcctcatatggtgggtggtcctgttccaatgagacgaagttatggtggt
ccaacaggtaatctctctccaaatagtagtagcaatggtggtggtagtggaggtcgttat
ggtagtggccctcctggtatggatggcggtccaccacaatcaatgcgttatcgtccttat
ccaactcaaccctcaagacacagtacctcctcaatggatccaagaggaattagagaatat
gttgatctcgatgctccaattgatcatgtacctgaaatcgattatagatctgcccttaaa
gaatatcaaaataaaaagagtttataa
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