Dictyostelium discoideum (cellular slime mold): DDB_G0277947
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Entry
DDB_G0277947 CDS
T00245
Symbol
shmt1
Name
(RefSeq) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Pathway
ddi00260
Glycine, serine and threonine metabolism
ddi00460
Cyanoamino acid metabolism
ddi00630
Glyoxylate and dicarboxylate metabolism
ddi00670
One carbon pool by folate
ddi01100
Metabolic pathways
ddi01110
Biosynthesis of secondary metabolites
ddi01200
Carbon metabolism
ddi01230
Biosynthesis of amino acids
ddi01240
Biosynthesis of cofactors
ddi04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
DDB_G0277947 (shmt1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
DDB_G0277947 (shmt1)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
DDB_G0277947 (shmt1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
DDB_G0277947 (shmt1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
DDB_G0277947 (shmt1)
Enzymes [BR:
ddi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
DDB_G0277947 (shmt1)
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GFIT
Motif
Pfam:
SHMT
Beta-prop_CAF1B_HIR1
WD40_Prp19
Motif
Other DBs
NCBI-GeneID:
8621237
NCBI-ProteinID:
XP_642026
dictyBase:
DDB_G0277947
UniProt:
Q54Z26
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Position
3:complement(47291..48755)
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AA seq
457 aa
AA seq
DB search
MGSVSGNTPLKEVDNEIFELMNREKDRQFKGLELIASENFTSRAVMEALGSHFTNKYAEG
YPGSRYYGGTEVVDELETLCQKRALKAFRLDESKWGVNVQPYSGSPANFAVYTALLRPHD
RIMGLDLPSGGHLTHGYQTDKKKISASSIFFESMPYQIGADGLIDYQRLEENALLFKPKL
IISGASAYPREWDYKRMRAIADKVGAYLMCDMAHYSGLVAAQLLDSPFDYCDVVTSTTHK
TLRGPRSGIIFFRRGKRVDGNGKEIEEYDIESKINFAVFPSLQGGPHENVIAGVAVALKE
ADSQEFKEYALQVKKNAAAIGNALMNKGYKLVTNGTDNHLILWDLRPKELTGNKFEKAAD
IANITVNKNAVHGDTNAISPGGIRIGSSALTSRGLKEADFEKIADFLDRIVSISLEIQGR
VGKKLVDFVVEINKSKELLDLRKEVEEFSSKFTLPGI
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgggttcagtatcaggtaatacaccattaaaagaagttgataatgaaatctttgaatta
atgaatagagaaaaagatagacaatttaaaggtttagaattaattgcctctgaaaatttt
acatcaagagcagttatggaagcattaggatcacattttacaaataaatatgcagaaggt
tatccaggttcaagatattatggtggtacagaagttgttgatgaattagaaactctttgt
caaaagagagcattaaaagcattccgtttggatgagagtaaatggggtgttaatgttcaa
ccatacagtggtagtccagccaatttcgcagtttacacagcattattaagaccacacgat
cgtataatgggtttagatttaccatcaggtggtcatttaactcatggttatcaaaccgat
aagaagaagatttcagcatcatcaatctttttcgaatcaatgccatatcaaattggtgct
gatggtttaatcgattatcaacgtttagaagagaatgcattattgttcaaaccaaaatta
atcatttcaggtgcatctgcttatccaagagaatgggattacaagagaatgagagcaatc
gccgataaagttggtgcttatttaatgtgtgatatggctcattacagtggtttagtagct
gctcaattattggattcaccattcgattattgtgatgttgtcaccagtaccactcataaa
accttaagaggaccacgttcaggaatcatcttctttagaagaggtaaaagagtcgatggt
aatggtaaagaaattgaagagtacgacattgaatcaaagatcaatttcgcagttttccca
tcactccaaggtggtccacatgaaaatgttattgctggtgttgctgttgctctcaaagaa
gccgactctcaagaattcaaagagtatgcccttcaagttaaaaagaatgccgctgccatt
ggtaatgctctcatgaacaaaggttataaattggttacaaatggtactgacaatcattta
attctttgggatttaagaccaaaggaactcactggtaataaatttgaaaaagctgccgat
atcgctaatatcaccgtcaataaaaatgccgtccatggtgataccaatgcaatttcacca
ggtggtattcgtattggttcatctgctctcacaagtagaggtttaaaggaagccgatttt
gaaaagattgctgatttccttgatagaatcgtttcaatctctcttgaaattcaaggtcgt
gtcggtaagaaattggttgattttgttgttgaaattaataaatcaaaagaattattagat
ttacgtaaagaagttgaagaattctcttcaaaattcactttaccaggtatttaa
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