Dictyostelium discoideum (cellular slime mold): DDB_G0277955
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Entry
DDB_G0277955 CDS
T00245
Symbol
nup43
Name
(RefSeq) WD40 repeat-containing protein
KO
K14305
nuclear pore complex protein Nup43
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Pathway
ddi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
DDB_G0277955 (nup43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ddi03019
]
DDB_G0277955 (nup43)
03036 Chromosome and associated proteins [BR:
ddi03036
]
DDB_G0277955 (nup43)
Messenger RNA biogenesis [BR:
ddi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
DDB_G0277955 (nup43)
Chromosome and associated proteins [BR:
ddi03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
DDB_G0277955 (nup43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WDR55
WD40
WD40_MABP1-WDR62_2nd
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
WD40_WDHD1_1st
Beta-prop_EIPR1
EIF3I
WD40_RFWD3
Beta-prop_EML
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_NUP159_NUP214
Beta-prop_DCAF4
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_BBS7
WD40_CFAP43
WDR54
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
8621241
NCBI-ProteinID:
XP_642030
dictyBase:
DDB_G0277955
UniProt:
Q54Z22
Structure
PDB
PDBj
LinkDB
All DBs
Position
3:complement(60115..61588)
Genome browser
AA seq
417 aa
AA seq
DB search
MSSVSVHYSTHKINKVRFLNRNFHNDTSLFVTGTNHPVLSKNKISVWGLESRQNSDEIEE
LASVPIDGIVTELKVIEINNKPMIIGSTSKGSIFMYSIFNLPNKFEYIGYDGLLDKKYEN
YNNINNINDTYDTCNLLKERIWFNSSSNNNNVNSNNINNNNYNNNNNNYNNNNNNNNNNN
NNNNNNNNNGSCINSFDISYDQHSLVTVGNDGVMNLLSIENLIPIYTNRYIDGLSVNVVK
SITSNQIITSGELGRYIKFWDIRSNSSQPVKTIKTQCPRIFSLAIHKDEQHIIAAGSSDG
QVNLFDIRNDYSIDQNKTHNSNVWELSFSKSNPNQLYSCSEDGFIYQYSYNKDNLGGGGM
MTLPNQINNTFDIYSKEVSLLQLPTSIGSIDSFDINSNINRLICCSTSSQCLIVKSL
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgagttcagtcagcgtacattatagcacacataaaataaataaagttagatttctaaat
agaaattttcataatgatacatcattatttgtaacaggtacaaatcaccctgtattatcg
aaaaataagatatcagtttggggattagaaagtagacaaaactctgatgaaattgaagaa
ttagcatcagtaccaatcgatggtatagttacagaattaaaagttattgaaattaataat
aaaccaatgataattgggtcaacatcaaaaggatcaatttttatgtattcaatttttaat
ttaccaaataaatttgaatatataggttatgatggtcttttagataaaaagtatgaaaat
tataataatatcaataatataaatgacacttatgatacatgtaatttattaaaagaaaga
atatggtttaatagtagtagtaataataataatgtaaatagtaataatataaataataat
aattataataataataataataattataataataataataataataataataataataat
aataataataacaataataataataatggtagttgtataaattcatttgatattagttat
gatcaacatagtttagttacagttggtaatgatggtgttatgaatttattatcaattgaa
aatttaataccaatttataccaatagatatattgatggattgagtgtaaatgttgtaaaa
tcaattacatccaatcaaatcataacatcaggtgaattgggtagatatattaaattttgg
gatataagatcaaattcatcacaacctgtcaaaacaattaaaactcaatgtcctagaata
tttagtttggcaattcacaaagatgaacaacatatcattgctgctggtagttctgatggt
caagttaatctttttgatattagaaatgattattcaattgatcaaaataaaactcataat
tcaaatgtttgggaattatcatttagtaaatcaaatccaaatcaattatattcatgttca
gaggatggattcatttatcaatattcatacaataaggataatttaggtggtggtggtatg
atgactttaccaaatcaaatcaataatacatttgatatctatagtaaagaagtttcatta
ttacaacttccaacttcaattggttcaattgattctttcgatattaattcaaatataaat
cgtttgatttgttgttcaacttcttcacaatgtttaattgtaaaatcactttaa
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