Dictyostelium discoideum (cellular slime mold): DDB_G0278335
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Entry
DDB_G0278335 CDS
T00245
Symbol
snrpC
Name
(RefSeq) C2H2-type zinc finger-containing protein
KO
K11095
U1 small nuclear ribonucleoprotein C
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Pathway
ddi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
DDB_G0278335 (snrpC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ddi03041
]
DDB_G0278335 (snrpC)
Spliceosome [BR:
ddi03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
DDB_G0278335 (snrpC)
Complex B
DDB_G0278335 (snrpC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-U1
CKAP2_C
Motif
Other DBs
NCBI-GeneID:
8621504
NCBI-ProteinID:
XP_642297
dictyBase:
DDB_G0278335
UniProt:
Q54YA5
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All DBs
Position
3:complement(716610..717246)
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AA seq
174 aa
AA seq
DB search
MPKYYCDYCDKYLTHDSPSVRKSHTVGKQHKLAVQLFYQQFEAEFTQSLIEARLKEYEES
KGRLIHQPPMGIIPTPYGQMYQQQQQQQQQQGILPFQGMQPPPHQQQGMVLSPGMPIHKM
QPHQFNNNNNPHQQHSFQPPHHQHHPHQQHQQHQQHQHQHQHQQQHNQPTIPGL
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaatattattgtgactattgtgataaatatttaacacatgatagtccttcagtt
agaaaatcacatacagttggtaaacagcataaactagcagttcagttattttatcaacaa
tttgaagcagaattcacacaaagtttaattgaagctagattaaaagaatatgaagaatca
aaaggaagattaattcatcaaccaccaatgggtattatacctactccttatggtcaaatg
tatcaacaacaacaacaacaacaacaacaacaaggaatactaccatttcaaggtatgcaa
ccaccaccacatcaacaacaaggtatggtcctttcaccgggaatgccaattcataagatg
caaccacatcaatttaataataataataatccacaccaacaacatagtttccaacctcca
catcaccaacatcatccacaccaacaacaccaacagcatcaacaacatcaacatcaacat
caacaccaacaacagcataatcaacctactatccctggtttataa
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