KEGG   Dictyostelium discoideum (cellular slime mold): DDB_G0278353
Entry
DDB_G0278353      CDS       T00245                                 
Symbol
smu1
Name
(RefSeq) WD40 repeat-containing protein
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
ddi  Dictyostelium discoideum (cellular slime mold)
Brite
KEGG Orthology (KO) [BR:ddi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ddi03041]
    DDB_G0278353 (smu1)
Spliceosome [BR:ddi03041]
 Complex B
  Other components
   Complex B specific factors
    DDB_G0278353 (smu1)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 Beta-prop_THOC3 WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML ANAPC4_WD40 WD40_MABP1-WDR62_2nd WD40_Gbeta Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_VPS8 LisH_TPL Beta-prop_RIG_2nd Beta-prop_DCAF4 Beta-prop_NUP159_NUP214 WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_EIPR1 Beta-prop_HPS5 Beta-prop_IFT122_1st Beta-prop_SPT8 WD40_MABP1-WDR62_1st Beta-prop_Nup120_160 Beta-prop_NWD2_C Beta-prop_ACSF4 Beta-prop_WDR19_1st Ge1_WD40 WD40_RFWD3 Beta-prop_Aladin Beta-prop_SCAP Beta-prop_Vps41 Beta-prop_WDR41 Beta-prop_WDR75_2nd Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N RMC1_N Lactonase Beta-prop_IP5PC_F DUF7039 DUF7165 zf_topless DUF2963 Glyco_transf_10
Other DBs
NCBI-GeneID: 8621512
NCBI-ProteinID: XP_642306
dictyBase: DDB_G0278353
UniProt: Q54Y96
LinkDB
Position
3:complement(737677..739535)
AA seq 530 aa
MSNPTSTTHHNIEIQSQDVIKLILQFLKENSLGNSLTALQEETGINLNAVDSKETFLNDV
KNGNWDSVLTVVSTLRLSTTLLMDLYEQIVELLHLKEYELCKYLIRKTEPLNYMKLNQQE
RYLKLENHLQREYIDLGDFYKYGITTEKRRKQLIEQLNNEIITVPSSRLLSLLSQSLHWQ
KHQGIIPDDCMEFDLFKGEVPFKKIESEEEQITTVLDKTIKFNNKNKPETIKFSPDSKYL
LTGSMDGFIEVWDYNTGKLSKSLAYQSNDDFMMHDDAILCIAFSKDGEFLATGSLDNKIK
VWQIKSGKCLRKFEPAHTNGVTCLQFSRNSTQILSGSFDSSLKIHGLKSGKALKIFRGHQ
SFVNDCCFNHDEDRVISCSSDGKIKIWDAKSSDCLQTITPTSVVTVRDISIRSITILLKN
PEFLLVCNSSQISIVSMKSQTISKTFTSENSKTFLVCTLSPLQNYLYAVDEDNILYTFDF
NSGSLLNKFKIHDQEVISISHHPTKNLLATTGSDCLLKIWKSNSNDNINN
NT seq 1593 nt   +upstreamnt  +downstreamnt
atgagtaaccccacatcaactacccatcataatattgaaattcaatcacaagatgtaatt
aaattaatattacaatttttaaaagaaaattcattaggtaattcattaacagctttacaa
gaagaaacaggtataaatttaaatgcagttgatagtaaagaaacatttttaaatgatgtt
aaaaatggtaattgggatagtgttttaactgttgtatcaacattaagattatcaactaca
ttattaatggatctttatgaacaaatagtagaattattacatttaaaggaatatgaactt
tgtaaatatttaattaggaaaactgaaccattaaattatatgaaattaaatcaacaagaa
agatatttaaaattagaaaatcatttacaaagagaatatatagatttaggagatttttat
aaatatggtataacaacagaaaaaagaagaaaacaactaattgaacaattaaataatgaa
attataacagtaccatcatcaagattattatcattattatcacaatcattacattggcaa
aaacatcaaggtataataccagatgattgtatggaatttgatttatttaaaggtgaggta
ccatttaaaaagattgaatcagaagaggaacaaataacaactgttttagataaaacaatt
aaatttaataataagaataaaccagagacaattaaattctcaccagattctaaatatctt
ttaacgggtagtatggatggatttatagaggtttgggattacaacactggtaaattatca
aagagtttagcctatcaatcaaatgacgattttatgatgcatgatgatgcgatactttgc
attgcgttctcaaaggatggcgagttcttagcaacgggttcattggataataaaatcaaa
gtttggcaaataaagagtggtaaatgtttaagaaaattcgaacctgctcatacgaatggt
gtgacatgtttacaattctcaaggaattcaacacaaattctaagtggttcctttgactcc
tctttgaaaattcatggtttaaaatcgggtaaggctttgaaaatctttagaggtcatcaa
tcgtttgtgaatgattgttgtttcaatcatgatgaagatagagttatatcatgttcaagt
gatggtaaaattaaaatatgggatgcaaaatcatcagattgtttgcaaactatcactcca
acaagtgttgtcacagttagagacatttcaattcgttcaatcactatattgctaaagaat
cctgaattccttttagtttgtaattcttctcaaatctcaatagtttcaatgaaatctcaa
actattagtaaaacatttacaagtgaaaattcaaaaactttcttggtttgcactttatct
ccacttcaaaattatttatatgcagttgatgaagataatatactctatacttttgatttc
aattctggttcattattaaataaatttaaaattcatgatcaagaagttattagtatatca
catcatccaactaaaaatttattagcaacaactggttctgattgtttattaaaaatttgg
aaatcaaattcaaatgataatattaataattaa

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