Dictyostelium discoideum (cellular slime mold): DDB_G0279045
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Entry
DDB_G0279045 CDS
T00245
Name
(RefSeq) hypothetical protein
KO
K14307
nucleoporin p58/p45
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Pathway
ddi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
DDB_G0279045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ddi03019
]
DDB_G0279045
Messenger RNA biogenesis [BR:
ddi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
DDB_G0279045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
8621849
NCBI-ProteinID:
XP_641936
dictyBase:
DDB_G0279045
UniProt:
Q54XC5
Structure
PDB
PDBj
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All DBs
Position
3:1551325..1553266
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AA seq
581 aa
AA seq
DB search
MFQTSGLFGQASTTTGGGLFGTAVTPTSTGGSGLFGTSTSIAPTSTGGGLFGTSTAVTPT
STGGGGLFGTSTAVAPTSTGGGGLFGGGGGGGLTSSIGPQGGGGLFGSTTLPTSTSGSGL
FGGQSSIGFGQPNSGSGSVSGGLFGSTSVQQPQQQQQQPQQPLITESTKFSDLPPQLKNE
LQILNKMIINNNSLMNSFSNYDTKINEISIGLDQVASVMDNLFNNFDIHIQSFKYLEESL
AKPLNSVNEQVHLLSTQFHSPFSQARPSKEMEIIVDSLVEKIDRIKQTILCVTPTNKSQS
QNLSFQESFISTLQSNQIILRNLAYIVDNLVTELERHKKHFLLYKKKYYNQNYNPFLKQP
KLNEKTDYHGSSSLHHSHFSQSSNLLSSQSSLFGSSMYGRQSQQQQQQQNPQQSQYLQSS
TFQPIQTSTSFFNPTSTTTTTSFGLTNNNNNNNSLASNNSSGGSSGSSLGSLGSLGSGSG
SGLFGSTATNNSLGSTSSSGSTSSSIGGSNSIVIPPLAIGSITNNNSGGGLFGSSNSSSN
SLNSLSTSSSNLFGPPQTPTLSGQGSTLGSVVFQSLVQLQI
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaaacaagtggactattcggacaagcctctactacaacaggtggtggtttgttt
ggtacagcagtaacaccaacatcaactggtggtagtggattatttggtacaagtacatca
atagctccaacatcaactggtggtggattatttggcacaagtacagcagtaacaccaaca
tcaactggtgggggtggattatttggtacaagtacagcagtagcaccaacatcaactggt
ggtggtggattatttggtggtggtggtggtggaggtcttacatcaagtattggtccacaa
ggtggtggtggtctatttggaagtacaacattaccaacatcaacaagtggtagtggtcta
tttggtggtcaatcttcaattggatttggtcaacccaatagtggtagtggtagtgttagt
ggtggtctattcggctctacttcagtacaacaaccacaacaacaacaacaacaaccacaa
caacctttaattacagaatcaactaaattctctgatttaccaccacaattaaagaatgaa
ttacaaattttaaataaaatgattataaataataattcattaatgaattcattttcaaat
tatgatacaaagataaatgaaatatcgattgggttggatcaagttgcatcagttatggat
aatttatttaacaatttcgatattcatattcaatcatttaaatatttagaagaatcatta
gcaaaaccattgaattcagtgaatgaacaagttcatcttttatcaacacaatttcattca
ccattttcacaagcaagaccttcaaaagagatggaaattatcgttgatagtttagttgaa
aaaattgatcgtattaaacaaactatattatgtgttactccaactaataaatcacaatct
caaaatttatcatttcaagaatcatttatatcaacattacaatcaaatcaaattatatta
agaaatttagcatatatagtggataatttagtaacagaattagaaagacataaaaaacac
tttttattatataaaaaaaaatattataatcaaaattataatccatttctaaaacaacca
aaattaaatgaaaaaacagattatcatggtagtagtagtcttcatcattctcatttttca
caatcatcaaatcttttatcatcacaatcatcattatttggatcttcaatgtatggaaga
caatctcaacaacaacaacaacaacaaaacccacaacaatctcaatatttacaatcatca
acatttcaaccaatacaaacatcaacatctttttttaatccaacatcaacaacaacaaca
acgtcatttggcttaaccaataataataataataataatagtttggcaagtaataatagt
agtggtggtagtagtggttctagtttaggtagtttaggtagtttaggtagtggtagtgga
agtggattatttgggagtacagctacaaataatagtttaggtagtacttcaagtagtggt
agtacaagtagctcaattggtggatcaaattcaatcgttataccaccattagcaattgga
tcaatcactaataataacagtggtggtggtttatttgggagttctaactcatcatcaaac
tctttaaattcattatcaacctcatcaagtaatctctttggaccacctcaaacaccaact
ttatcaggacaaggttctacacttggctctgtggtttttcaatctctggttcagcttcaa
atttag
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