Dictyostelium discoideum (cellular slime mold): DDB_G0279167
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Entry
DDB_G0279167 CDS
T00245
Symbol
cut5
Name
(RefSeq) BRCT domain-containing protein
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Pathway
ddi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DDB_G0279167 (cut5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ddi03032
]
DDB_G0279167 (cut5)
03400 DNA repair and recombination proteins [BR:
ddi03400
]
DDB_G0279167 (cut5)
DNA replication proteins [BR:
ddi03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
DDB_G0279167 (cut5)
DNA repair and recombination proteins [BR:
ddi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
DDB_G0279167 (cut5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
BRCT_2
LIG3_BRCT
RTT107_BRCT_5
BRCT_3
T6SS_Tse3_N
Motif
Other DBs
NCBI-GeneID:
8621904
NCBI-ProteinID:
XP_641820
dictyBase:
DDB_G0279167
UniProt:
Q54X69
LinkDB
All DBs
Position
3:complement(1718126..1722079)
Genome browser
AA seq
1317 aa
AA seq
DB search
MVDSQPAIAFQKSNSSNNFINNNNNNNSNNNNNNNNYNNNNNIIVQQPIFQDLKFYLQGD
FIQNEQGISEKVTKLIQKHGGKRIFSESDDCIFLFQDFMGDAYETARLFKKPIISITYLY
ECAKKNSPLDFSLIKEYPIYSDCLKGCVICTSGFNDEIKSNMSTCIEQLCGEFKYTLSTK
VTHVITNTDASGSKRTRQARALGIPMVTSGWLQDCWGNGKRVDERNYLIPLFFGCLICIT
GFTSLERKEIEREVKKGGGMFSGDLNHFCSLLISSGAISEKCVKAEIWSIPVVTIDWFRA
TIQSGIYQNENDYLLQNQQQQQQQHQSNSLQFQQPPPQQQQQFIQQTRHRQLQKQQLQSL
PVQPENTFSGTTSSLSNTKSYIRPTPMPSKAQSSRTNFNNNNINNNYYNNSNNNNKNRQP
NNNYNNNNNNNNNNNIMMLEEATNEIHLFNGKNILIKGFDTEETERIKEHVMKYASNVVD
SNFIASQWTSTTFDFHYIIVPHGKKVTTQFDSGFENIPKVTIDWFDKCLNNNTLYEPDEC
VIFKPLPNLSLLKNYSITTEGFPENETSFIRSTSKLLGAKFTSKLYPTTTTHLITCMKGP
KYDMAISIGIPVVTPEWLYSSASSGIKLDENLYLFNKLLIVDSIINNNNDNNNNNNNNNN
NNNNNDNNNNNINNESIIFKDLVLFISSKLNGSLESLNYIKYIKELGGTYTTSGFDKITH
YITNEIDNTETPGFVDTNFFQVHPNWLEQCWSSRKRLLESEFQPLKAISNENDGDVPTIQ
SLTKTPSQLFNAINNNNNNGNNNINKNNDNNNEKQKPEELEPTIEMKPLEIDEEEINNNN
NNNNNNNNNNNNNDDEKMIDHDEQDKDIEESEEINKSSTITSTTINTTTNTTTTKPSGMD
TIFKILSSFPPNGNIINNNHSMKSHSKISFQKRSIDFYNNQQNNMSMPQKPNKPFVNISA
LIGNESEKEQDIESDDDNNNNNNNNNNNNNNNNNNSFSNNNSGNSGNTFGNNPSESYDDE
ENDLNNYYATSSYSETSSQMITYGEDTEKKKKEKLMESNFFSKSNANQSFLSNDNAQQSL
LNMLNRRGNLYDNFPSPQQQSRSKKYVFAISGITDDAEQNQVKDIISRLGGLFEAVIAKN
VTHVVTKQISRSEKIMGGCASGAWILQVSYFTASSNSGRFADEPAHQWVPKTNTDPKSQE
HIWTQSAVICQRLVAQNGGRKIFEGARIAYFKINKNIDAWKKILLCGDAEVIEVDYPIDL
KQLYSNNITHLLLIKKKGVEPGEDISTITNDPNSNISILVSNQIVHCLNAGQYLVQK
NT seq
3954 nt
NT seq
+upstream
nt +downstream
nt
atggtagattcacaaccagcaatagcatttcaaaaatctaattcctcaaataattttata
aataacaataataataataatagtaacaataataataataataataattataataataat
aataatataatagttcaacaaccaatatttcaagatttaaaattttatcttcaaggtgat
tttatacaaaatgaacaaggtatttcagaaaaagtaacaaaattaattcaaaaacatggt
ggaaagaggatattttcagagagtgatgattgtatattcttatttcaagattttatggga
gatgcctatgaaacagctcgtttatttaaaaaacctataataagtataacctatctttat
gaatgtgccaaaaagaatagtccattagatttttcattgatcaaagagtatccaatttat
tccgattgtttaaagggttgtgtaatttgtacaagtgggttcaatgatgaaattaaatca
aatatgtcaacatgtatagaacaactttgtggtgaatttaaatacacactatcaacaaaa
gtgacacatgtaataacaaacacagatgcatctggttcaaaaagaactagacaagctaga
gcattgggtataccaatggtaacatcaggttggttacaagattgttggggtaatggtaaa
agagtggatgaaagaaattatttaatacctttgttttttggttgcttaatttgcataact
ggtttcacttccttggaaagaaaagaaattgaaagagaagttaaaaaaggtggtggtatg
ttttcaggtgatttaaatcatttttgttctttattaatttcaagtggtgcaattagtgaa
aaatgtgttaaggctgaaatttggagtatacctgtagtgactatagattggtttagagca
actattcaatctggtatttatcaaaatgaaaatgattatcttttacaaaatcaacaacaa
caacaacaacaacatcaatcaaatagtttacaatttcaacaaccaccaccacaacaacaa
caacaatttattcaacaaacacgtcacagacaattacaaaagcaacagttacaatcttta
ccagttcagcctgaaaatacctttagtggtacaactagtagtttatcaaatacaaaatct
tatataaggccaacaccaatgccaagcaaagctcaaagttcaagaacaaattttaataat
aataatattaataataattattataataatagtaataataataacaagaatcgtcaacca
aataataattataataataataataataataataataataataatataatgatgttagaa
gaagcaacaaatgaaattcatttatttaatggaaagaatatattgataaaaggatttgat
actgaggaaacagaaaggataaaagagcatgtaatgaagtatgcatcaaatgtagtagat
tcaaattttatagctagtcaatggacttcaacaacatttgattttcattatattattgta
ccacatggaaagaaagttacaacacagtttgatagtggatttgaaaatataccaaaggtt
acaattgattggtttgataaatgtttaaacaacaatacactctatgaacccgatgaatgt
gttatttttaaaccattaccaaatttatccctattaaagaactattcaattacaacagaa
ggttttcccgagaatgaaacttctttcattaggagtacatcaaaattattaggtgccaaa
ttcacatcaaaattatatccaacaaccactactcatttgataacctgtatgaaaggtcca
aaatatgatatggccatatcaattggtattccggttgtaacaccagaatggttatatagt
agtgcttcttctggtattaaattggatgaaaatttatatctttttaataaattattaata
gttgattcaattataaataataataatgataataataataataataataataataataat
aataataataataatgataataataataataatataaataatgaatcaataatttttaaa
gatttagttttatttatttcaagtaaattaaatggatcattagaatcattaaattatatt
aaatatattaaagaattgggtggtacatatacaacatcaggttttgataaaattacacac
tatataacgaatgaaattgataatacagaaacaccaggttttgttgatacaaactttttt
caagttcaccctaattggttagaacaatgttggtcctcaagaaaaagattattagagtct
gaattccaaccattgaaagctatttcaaatgagaatgatggtgatgttccaactattcaa
tcattaacaaaaacaccttcacaattattcaatgctataaataataacaataacaatggt
aataataatattaataaaaataatgataataataatgaaaaacaaaaaccagaagaattg
gaacccacaattgaaatgaaacctttagaaatcgatgaggaggaaattaataataataat
aataataataataataataataataataataataataatgatgatgaaaaaatgattgac
catgatgaacaagataaagatatagaagaaagtgaagaaataaataaaagttcaacaata
acttctaccactattaatacaactacaaatacaactacaacaaaaccaagtggaatggat
acaatttttaaaatattatcatcatttccaccaaatggcaatatcattaataataatcat
agtatgaaatctcattcaaaaatttcatttcaaaaaagaagtattgacttttataataat
caacaaaataatatgtcaatgcctcaaaaaccaaataaaccctttgtaaatatatcagca
ctaattggtaatgaatctgaaaaagaacaagatatagaatcggatgatgataacaataat
aataataataataataataataataataataataataataataatagttttagtaataat
aatagtggaaatagtggaaatacttttggtaataatccaagtgaaagttatgatgatgaa
gaaaatgatttaaataattattatgcaacttcatcatatagtgaaacaagttcccaaatg
atcacatatggtgaagatacagaaaaaaaaaagaaagagaaattaatggaatcaaatttc
ttttcaaaatcaaatgctaatcaatcatttttaagtaatgataatgctcaacaaagttta
ttaaatatgttaaatagaagaggcaatctatatgataatttcccatcaccacaacaacaa
tctcgttcaaaaaaatatgtatttgcaatttctggtatcactgatgacgccgaacaaaat
caagtcaaagatataatttcaagattgggaggattgtttgaggctgtcatcgcaaagaat
gtaactcatgtcgttacaaaacaaatttcaagatcagagaaaattatgggtggttgcgca
tcaggtgcatggattttacaagtttcctatttcactgcctcgtcaaatagtggaaggttt
gcagatgaacctgcccatcaatgggtcccaaaaactaatactgacccaaagagtcaagaa
catatttggacacaatcagcagtcatttgtcaaagattagtggctcaaaatggtggtaga
aaaatatttgaaggtgcaagaattgcctattttaaaattaataagaatattgatgcttgg
aaaaagattttattatgtggtgatgcagaagtgattgaagttgattacccaattgatctc
aaacaactttatagtaataatataactcaccttttactcataaagaaaaaaggtgtagaa
cctggtgaagatatctcaacaattaccaatgatccaaatagtaatatctcaattttagtc
tccaatcaaatagtgcattgtttaaatgctggtcaatatttagttcaaaagtaa
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