Dictyostelium discoideum (cellular slime mold): DDB_G0279373
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Entry
DDB_G0279373 CDS
T00245
Name
(RefSeq) CHE group protein
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Pathway
ddi03082
ATP-dependent chromatin remodeling
ddi03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
DDB_G0279373
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
DDB_G0279373
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ddi01009
]
DDB_G0279373
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ddi03021
]
DDB_G0279373
03036 Chromosome and associated proteins [BR:
ddi03036
]
DDB_G0279373
Protein phosphatases and associated proteins [BR:
ddi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
DDB_G0279373
Transcription machinery [BR:
ddi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
DDB_G0279373
SWI/SNF complex
DDB_G0279373
Chromosome and associated proteins [BR:
ddi03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
DDB_G0279373
PBAF complex
DDB_G0279373
SWI/SNF complex
DDB_G0279373
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
Motif
Other DBs
NCBI-GeneID:
8622017
NCBI-ProteinID:
XP_641825
dictyBase:
DDB_G0279373
UniProt:
Q54WV6
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All DBs
Position
3:2004876..2006425
Genome browser
AA seq
496 aa
AA seq
DB search
MQDISDSNDEDINKNNTTTTTTTSSTNIQSNLTPLSSRRRRTPTVTTPPTKQKGGYPKEE
QDEEFDEDVDIEEEEEEEDISSEPSEDDDDDEDYDDGGSKRKRKSKKQKQQEEEEEAAVA
AASAATSNRNIIFDENGNEIYEDEGDDEGDEEEDEEEDEEMDEEGDEEEDEEDDEDEGEE
RLEDLDSSDSSDVEDTTLLDQSQQTQQTQHQQLQQQLLLQQTQQQLQQHHHQIQDGDKLF
QSGDPGDDFLIPIRLDIQSSVYKIGDYLLWNLNERDISPEYYSKRLCIELDYPEWFEFMI
TNSIANQIIYGKSIIKEFRKILPKLKQIFKECIVTISLDLNVNGLYLKDRFEWDIIGPNL
PESFAKSISMDLGLSREFENIIVYSIREQIQTHYSQITQQYNLNPNGFRYYSSMRNQPIH
HDQILRNDYQLTYFTPTISYRQPPKVGGYDPPTAYFIQQNHLRQQTLQQQQQLKYQLRTS
TIQQQQHQQHPQQFVR
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgcaagatataagtgatagtaatgatgaagatataaataaaaataataccacaacaacc
actactacctcttcaactaatatacaatcaaatttaacaccattatcaagtagaaggaga
agaactccaacagtaacaacaccacccaccaaacaaaaaggtggatatcctaaagaagag
caagatgaagaatttgatgaagatgtagatattgaagaggaagaagaggaggaagatata
tcatcagaaccatccgaggacgatgacgatgatgaagattatgacgatggtggtagtaaa
aggaagagaaaatcaaagaaacaaaaacaacaagaggaagaagaagaagcagcagtagca
gcagcatcagcagcaacgtctaatcgaaatatcatatttgatgaaaacggtaacgagata
tacgaagacgagggtgacgacgagggcgacgaagaggaggacgaggaggaggacgaagaa
atggacgaggagggcgacgaagaggaggatgaggaggatgatgaagacgagggggaagag
aggttggaggatttagacagcagcgacagcagcgacgtcgaggacaccacactattagac
caatctcaacaaactcagcaaactcaacaccagcaattacagcaacaattattattacaa
caaactcaacaacaattacaacagcaccatcaccaaatacaagatggtgataaactattc
caaagtggggacccaggtgacgactttttaattccaatcagattagatattcaaagtagt
gtttacaaaatcggtgattacctattatggaatttaaacgaacgtgacatctcaccagaa
tactattcaaaacgtttatgcatcgaattggattaccctgaatggtttgaatttatgatc
accaattcaatagcaaatcaaatcatctatggtaaaagcatcattaaagaatttcgtaaa
atcttaccaaaattaaaacaaatatttaaagaatgtatagtaacaattagtttagattta
aatgtaaatggtctttacttaaaagatagattcgaatgggatatcattggtccaaattta
cctgaatcatttgcaaaatcaatttcaatggatttaggtttatcaagagaatttgaaaat
attattgtttattcaattagagaacaaattcaaactcattatagtcaaattacacaacaa
tataatttaaatccaaatggatttagatattattcatcaatgagaaatcaaccaattcat
catgatcaaatattaagaaatgactatcaattaacttatttcacaccaaccattagttat
agacaacctccaaaggtggggggatatgatccaccaacagcttatttcattcaacaaaat
catcttagacaacaaactcttcaacaacaacaacaattaaaatatcaattaagaacttca
actatacaacaacaacaacatcaacaacatccacaacaatttgttcgttaa
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