Dictyostelium discoideum (cellular slime mold): DDB_G0279377
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Entry
DDB_G0279377 CDS
T00245
Symbol
gtf2f1
Name
(RefSeq) transcription initiation factor IIF subunit alpha
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Pathway
ddi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
DDB_G0279377 (gtf2f1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ddi03021
]
DDB_G0279377 (gtf2f1)
Transcription machinery [BR:
ddi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
DDB_G0279377 (gtf2f1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_alpha
WHD_SOWAH
Motif
Other DBs
NCBI-GeneID:
8622019
NCBI-ProteinID:
XP_641828
dictyBase:
DDB_G0279377
UniProt:
Q54WV4
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All DBs
Position
3:<2008109..>2009852
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AA seq
556 aa
AA seq
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MSESTNNPNEKTYKINLVKGTKKWNIAKFSNKIDLSSFSKPVRMYKFNPIANMINNESNN
FGQPTTSTYTNNHYSYKNIQPTMTSAPNGTNSTGTTPNTTTTTTTTTTTTTTTTTAAGTP
GAPNPAAATQPFVRKKRYEAKPVNPKTIPWKLEDSEGNNTYQGNVEGNQASSNYFLFMFQ
SDGSIKAVPCNDWYNFRPKKEFQSLTTEEAEDFMKKKNQEWDVFTSRLQKKTDPSGSGSG
GSESSGKKSIEELEEAEHRNRNEDPNRYKTTNEEKKKKKAPARRREREDEGNGEDGDAPD
FESKFDDDDDDTYMDGDGLTGEDENQIEEDEEEEDVDLTEGGLEMKKMIKKQQQQNDSED
DLADDDDKKDNNGGTGGGDDEDDDEDDEDPDQDDLSNLPKVFGKSNADGTTNSSVKKEDD
GGKDSKSSKKSKKKDKDSSPKSKEKKSKKNKSDSSVDNRESKKIKKEPSSPQAVQPNSPS
QQQQQQQQNIDPNDPPFTEEYIKIVLQKSKKVKSLDLINIFKGPLKNPDNKPIFLAMVHN
VARVVEENGVKYLIPK
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaatcaacaaataatccaaatgaaaaaacatataaaatcaatctagttaaaggt
acaaagaaatggaatatagcaaaattttcaaataagattgatttatcaagcttttcaaag
cctgtaagaatgtataaattcaatccaatagcaaatatgataaataatgaaagtaataat
tttggtcaaccaacaacaagtacctatacaaataatcattacagttataagaatattcaa
ccaacaatgacatcagcccctaatggtacaaattcaactggtactacaccaaatactaca
accactaccacaaccactactacaacaactacaacaactacaactgcagcaggaacacca
ggcgcaccaaatcctgccgcagcaactcaaccatttgtaagaaagaaaagatatgaagca
aaaccagttaatccaaaaactatcccttggaaattagaagatagtgaaggtaataataca
tatcaaggtaatgttgaaggtaatcaggcctcttcaaattactttttatttatgtttcaa
agtgatggttcaattaaagctgtaccatgtaatgattggtataattttagaccaaaaaaa
gaatttcaatctttaacaactgaagaagctgaagattttatgaaaaaaaagaatcaagaa
tgggatgtttttacatctagattacaaaagaaaactgatccatcaggtagtggaagtggt
ggtagtgaatcaagtggtaaaaagagtattgaagaattagaagaagcagaacatagaaat
agaaatgaagatccaaatagatataaaacaaccaatgaagagaaaaagaaaaagaaagca
cctgcaagaagaagagagagagaggatgaaggtaatggtgaagatggtgatgcaccagat
tttgagagtaaattcgatgatgacgatgatgatacctatatggatggtgatggtttaaca
ggtgaagatgaaaatcaaattgaagaggatgaagaagaggaagacgttgatttaacagaa
ggtggtttagaaatgaaaaaaatgattaaaaaacaacaacaacaaaatgattcagaggat
gatcttgctgatgatgacgataaaaaagataacaatggtggtactggtggtggtgatgat
gaggatgatgatgaagatgatgaagatccagatcaagatgatctttcaaatcttccaaaa
gtatttggaaaatccaatgcagatggtacaaccaattcttcggttaaaaaggaggatgac
ggtggtaaagattcaaaatcctctaaaaagagtaagaaaaaggataaagatagctcacca
aaatcaaaggaaaagaaatctaaaaagaataaatccgattcatcagtcgataatagagaa
tctaaaaagattaaaaaagaaccatcttcacctcaagcagtccagccaaattctccatca
caacaacaacaacaacaacaacaaaatatcgatccaaatgatcctccattcactgaagaa
tatattaaaatcgtcttacaaaaaagtaaaaaggttaaatccttagatttaatcaatatc
tttaaaggtccactaaaaaatccagataacaaaccaattttccttgcaatggttcataat
gttgctcgtgttgttgaagaaaatggtgtaaaatatttaattccaaaataa
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