Dictyostelium discoideum (cellular slime mold): DDB_G0279923
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Entry
DDB_G0279923 CDS
T00245
Symbol
apnA
Name
(RefSeq) apurinic/apyrimidinic endonuclease
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Pathway
ddi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DDB_G0279923 (apnA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ddi03400
]
DDB_G0279923 (apnA)
Enzymes [BR:
ddi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
DDB_G0279923 (apnA)
DNA repair and recombination proteins [BR:
ddi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
DDB_G0279923 (apnA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-GeneID:
8622321
NCBI-ProteinID:
XP_641436
dictyBase:
DDB_G0279923
UniProt:
Q966U0
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All DBs
Position
3:complement(2784977..2786706)
Genome browser
AA seq
542 aa
AA seq
DB search
MNPFVNLFIQHSKKQIFLNNNKNNILLNFNSKLYSTITYKNNNNNNNNQIINNKTIMKRK
NNEIIQTEEDDDNDNGGIHDCDSCDEVDNEEIIPESPPSKKLQQQQQQQQQQQSKLKPKQ
TSITDFFSPTVKTSKADKISPFFSNVNNASTTNTTTNNKNVNKKTTTTTTTKKRNNKDEE
NEDDNEEEEEEEEEEEDKKSKKKTTTTTTTTTTTAYKKKSSPKKKKVNPTENKFSTINYK
DDQYVQKEEYSSSKKEKLENVKIGGHVSIKNGYPTLIQSVVAQGFKAVAFFTNPPRTWKH
HTVKLDDSIKFKQSCKSLNFDVNCILPHGSYFLNLGSPNKENLQKSRDLMIHEMKNCEIL
GVKHFNFHPGSHLNEISESESIKIVAESLDYILERTKDVVAVIECTAGQGTNLGYTFEHL
RDMIALVKDKTRVGVCLDTCHMFAAGYNISTKSNCDVIFQEFDKVVGFKYLKGVHLNDSK
STCGSKLDRHENIGKGHIGTPCFKYLVNDKRFQNIPMILETVGPYDQEVKLLYSFIEDDD
KK
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgaacccatttgttaatttatttattcaacattcaaaaaaacaaatttttttaaataat
aataaaaataatattttattaaattttaatagtaaactttatagtactataacatataaa
aacaataataataataataataatcaaattattaataataaaacaataatgaaaagaaag
aataatgaaataattcaaactgaagaggatgatgataatgataatggaggaattcatgac
tgtgatagttgtgatgaagttgataatgaagaaattattcccgaatcccctccatcaaaa
aagttacaacaacaacaacaacaacaacaacaacaacaatctaaattaaaaccaaaacaa
acctctataactgatttcttttcnccaactgtaaaaacttcaaaagctgataaaatatca
ccttttttttcaaacgttaataatgcatcaactacaaatacaaccactaataataaaaat
gtaaataaaaaaacaacaacaacaacaactacaaaaaaaagaaataataaagatgaagaa
aatgaagatgataatgaagaagaagaagaagaagaagaagaagaagaagataaaaaatca
aagaaaaaaactacgacaactacaacaacaacaacaacaacagcatataaaaagaaaagt
tcaccaaaaaaaaaaaaagttaatccaacagaaaataaattttcaacaattaattataaa
gatgatcaatatgtacaaaaggaagagtatagttcaagtaaaaaagagaaattagagaat
gtaaagattggtggtcatgtctcaatcaagaatggttatccaacattaattcaatcggtt
gttgctcaaggttttaaagctgttgcattctttaccaatccaccacgtacttggaaacat
catacagtcaaattagatgatagtattaaatttaaacagtcctgtaaatctctaaatttc
gatgttaattgtatcttaccacatggcagttatttcttaaatttaggttctccaaataaa
gaaaatttacaaaaatcaagagatttaatgattcatgaaatgaaaaattgtgaaatatta
ggagttaaacattttaattttcatccaggatcacatttaaatgaaattagtgaatcagaa
tcaataaagatagttgctgaatcattggattatattttagagagaactaaagatgttgtt
gcagtcattgagtgtacagctggtcaaggtacaaatttaggttacacatttgaacattta
cgtgacatgattgcattggttaaggataaaacaagagttggtgtttgtttagatacttgt
catatgtttgctgcaggttataatatttcaacaaagagtaattgtgatgtgattttccaa
gagtttgataaagtggttggtttcaaatatttaaaaggtgttcatttaaatgactcaaaa
tcaacttgtggttcaaaacttgatcgtcatgaaaatattggtaaaggtcatattggaacg
ccatgtttcaaatatttagtaaatgataaacgttttcaaaatattccaatgattttagaa
actgttggtccatatgatcaagaagttaaattattatattcatttattgaagatgatgat
aaaaaataa
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