KEGG T00245: DDB

Dictyostelium discoideum (cellular slime mold): DDB_G0279967

Entry

DDB_G0279967      CDS       T00245

Name

(RefSeq) UPF0406 family protein

K23093

U6 snRNA phosphodiesterase [EC:3.1.4.-]

Organism

ddi Dictyostelium discoideum (cellular slime mold)

Brite

KEGG Orthology (KO) [BR:ddi00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ddi03041]
    DDB_G0279967
Spliceosome [BR:ddi03041]
Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    DDB_G0279967

SSDB

Motif

Pfam:

HVSL 2_5_RNA_ligase2 PDXDC1-like_cen2 LigT_PEase B12-binding

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

dictyBase:

UniProt:

LinkDB

Position

3:2780826..2781737

AA seq 275 aa
MEFLKHYEDDEDQDDENNTKDENVNKINKRQHFEIENVIDEIPDLPLSFFENFKKIKHYS
SEIIDETNKKTRLFEHVEGNYPTFIYFKVPTKSRNDIKELIEQVKEIGNEINIKQDTETC
FHISISRTFPIREHHIETFTQELKKTLKNQRSIDIQLSKECCVFINDNQSRIFLSIPINQ
SFKSNILKLIERIDSCLSLFKFPKYYDNPEPHLSISWSLITNNNNETNDENINYIPLNKF
KNKEIIRDNLKLTDSFKVSRIFWNIGKTESFIDLQ

NT seq 828 nt +upstreamnt +downstreamnt
atggaatttttaaaacattacgaagatgatgaagatcaagatgatgaaaataacactaaa
gatgaaaatgtaaataaaataaataaaagacaacattttgaaattgaaaatgttattgat
gaaattccagatttaccattatctttttttgaaaacttcaagaaaatcaaacattattca
tctgaaattattgatgaaacaaataaaaaaacaagattatttgaacatgttgaaggtaat
tacccaacattcatttattttaaagttccaactaaaagtagaaatgatataaaagaatta
attgaacaagttaaagagattggtaatgaaattaatattaaacaagatactgaaacttgt
tttcacatttcaatttctagaacatttccaataagagaacatcatattgaaacatttaca
caagaactaaagaaaacattaaagaatcaaagatcaattgatattcaactatcaaaagaa
tgttgtgtatttataaatgataatcaatctagaatatttctatcaataccaattaaccaa
tcttttaaatcaaacattttaaaattaattgaaagaattgattcatgtttatcattattt
aaatttccaaaatattatgataaccctgaaccacatttatcaatttcatggtcattaatt
actaataataataatgaaactaatgatgaaaatattaattatatacccttaaataaattt
aaaaataaagaaataataagagataatttaaaattaacagattcatttaaagtttcaaga
atattttggaatattggtaaaactgaatcatttatagatttacaataa

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