Dictyostelium discoideum (cellular slime mold): DDB_G0281215
Help
Entry
DDB_G0281215 CDS
T00245
Symbol
brf1
Name
(RefSeq) TATA box-binding protein-associated factor, RNA polymerase III, subunit 2
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ddi03021
]
DDB_G0281215 (brf1)
Transcription machinery [BR:
ddi03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
DDB_G0281215 (brf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
zf-RRN7
TF_Zn_Ribbon
Peptidase_M56
OrfB_Zn_ribbon
Motif
Other DBs
NCBI-GeneID:
8622948
NCBI-ProteinID:
XP_640891
dictyBase:
DDB_G0281215
UniProt:
Q54U85
LinkDB
All DBs
Position
3:complement(4228761..4230881)
Genome browser
AA seq
706 aa
AA seq
DB search
MSKNCGNCGNDSFASSNEGSVVCTACGTVKESANIVSEVQFGGDSSIVGTFVSATRKPSS
YRSLGGRDSRAMSVENARKKLDQIGNSLRIRSHLIDSAQRTFELAMENNFTKGRQTRLVA
AACLYIVCRRERTPHLLIDFSENLQVNVFIVAGTFLQLIKLLNIQLPIVDPSFFIQRFAS
ALEFGDQTKDVIATANKLVARMKRDWMSIGRKPSGICGASLYIASKIHGFKRSMKEIVHV
VKIGEQTLINRLDEFRKTPTATLRFDEFNGMDLEDQCDPPSFTRARLKEKKEEEKLKLLE
EKKERKRLKKEKKKLLELENNKDNKEIIIKENKEEIEKKLEKKQDLKKDKKDKIKGGEGE
EEEEEEEDDDDDDEEEEEDNLNEETKGDNKKNKKRKRELLKDDDDIEKESNDIVKGSQNV
QSIKDITNVDSIPTTLLENIEKFEKIQSDIKTLAQKVKNEMDEKIKESQSQEPDTTPPPS
STTTTQTTTTTTTSQNNESSAPIDLPTPINKTMDSVVSYPTITSTIDQSVFAPNDELENL
SDEELDFYLEHDKDTVKKKEEIWVELNKEWIEKNEERQREIEEDIKAGRPPRKRKAPVSK
KSAENAQAAAEEELKKRTRNAKLVEKLGLFKPNFVTMGLFGGAGASNNQAAVGAMLSTDG
TSKNTSINPKETNKEDDDDDDYEPIQPIQSGSLLSRNFNNYEEDDY
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaaattgtggaaattgtggaaatgattcatttgcgtcatcaaatgaaggtagt
gttgtatgtacagcatgtggtacagttaaagaatcagcaaacattgtatcagaagtacaa
tttggaggagattcatcaattgttggtacatttgttagtgcaactaggaaaccatcatcc
tatagatcattaggaggaagagattcaagggcaatgtcagtagagaatgcacgtaaaaaa
ttggatcaaattggtaactcattaagaattagaagtcatttaatcgatagtgcacaaaga
acctttgaattggcaatggagaataatttcaccaaaggtagacaaacaagattggttgca
gcagcatgtttatatatagtttgtcgtagagagagaacacctcatctactaattgacttt
tcagagaatcttcaagtcaatgtattcatagttgctggtacattccttcaattgatcaaa
ttattaaatattcaattaccaattgtagatccaagtttcttcattcaaagatttgcatca
gccttagagtttggtgatcaaactaaagatgtaattgcgaccgctaataaattagtcgct
agaatgaagagagattggatgtcaattggtagaaagccatcaggtatttgtggtgcttca
ttatatatcgcttcaaaaattcatggtttcaaaagatcaatgaaagaaatcgttcatgtc
gttaaaattggtgaacaaactttaatcaatcgtttagatgaatttagaaaaacaccaact
gctacccttagattcgatgaattcaatggtatggatttagaggatcaatgtgatccaccc
tctttcacaagagcaagattaaaagaaaagaaagaagaagaaaaattaaaacttttagaa
gaaaaaaaagaaagaaaaagattaaaaaaagagaaaaaaaaattacttgaacttgaaaat
aataaagataataaagaaataattataaaagaaaataaagaagaaatagagaaaaaattg
gaaaaaaaacaagacttaaaaaaagataaaaaagataaaattaaaggaggtgaaggtgaa
gaggaagaagaagaagaggaagatgatgatgacgatgatgaagaggaggaagaagataat
ttaaatgaagaaactaaaggtgataataagaagaataaaaaaagaaagagagaattatta
aaagatgatgatgatattgaaaaagaatcaaatgatatagtcaaaggttcacaaaatgtt
caatctattaaggatattacaaatgtagattcaattccaacaacacttttggagaatatt
gaaaagtttgaaaaaattcaatccgatattaaaactttagctcaaaaagtaaaaaatgaa
atggatgaaaaaattaaagaaagtcaaagtcaagaaccagatacaacaccaccaccatca
tcaacaacaaccacacaaacaacaacaactacaactacaagtcaaaataatgagagttca
gcaccaatagatttaccaacaccaattaataaaacaatggattctgttgtatcataccca
actataacatcaacaattgatcaatcagtttttgcaccaaatgatgaattggaaaattta
agtgatgaagaattagatttttacttggaacatgataaagatactgtaaaaaagaaagaa
gagatttgggtggaattaaataaagaatggattgaaaagaatgaagaaagacaaagagag
attgaggaggatattaaagctggtagaccaccaagaaagagaaaagcacctgtaagtaag
aaatctgctgaaaatgcacaagctgccgctgaagaagaattaaaaaagagaactagaaat
gcaaaactcgttgagaaattaggtctcttcaaaccaaatttcgttactatgggtttattt
ggtggggctggtgcatcaaataatcaagctgccgtaggtgcaatgttatctactgatggc
acctctaaaaatacctctatcaatccaaaagaaacaaataaagaagacgatgatgatgat
gattatgaaccaattcaaccaattcaatctggtagtttattaagtcgtaattttaataac
tatgaagaagatgattattaa
DBGET
integrated database retrieval system
