Dictyostelium discoideum (cellular slime mold): DDB_G0281363
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Entry
DDB_G0281363 CDS
T00245
Name
(RefSeq) hypothetical protein
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Pathway
ddi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DDB_G0281363
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ddi03019
]
DDB_G0281363
Messenger RNA biogenesis [BR:
ddi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
DDB_G0281363
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
Motif
Other DBs
NCBI-GeneID:
8623027
NCBI-ProteinID:
XP_640748
dictyBase:
DDB_G0281363
UniProt:
Q54U17
LinkDB
All DBs
Position
3:4410114..4413041
Genome browser
AA seq
934 aa
AA seq
DB search
MEEEQVYQKAYECFQRKEFEQSLKLLKEIKEKNQYQSTVEIQMNILVAEFYNRNCLNHLK
LIEDLNQLLKSLVTNKQHQPQQQPSQDNSSPILSSTSITSPPPPTIGLDSQPQSTTTTTS
TSTTSTTSTTSTTQTQTINDLLDNEQALILYNQAVIYFNIKQHGSSYKILEQLFSQVLSF
DDFLGIRICLLFINVTIEGQLYDKAYSILLFLDKSFDHFFYISGDNEQTNNNNYQNTQMT
PTEFKFLIHFYKSKIYLLSNLHYLKAYEDIEKALELSLKIDYSPLIGSCNSLKANYFSMK
LDTQNTIKHLLSSNISSTTTTTTTTTNSIVKSSLSFGNDLIMESITPGIFYNNIGSLHFN
IQDYTLANYYFSKSLKETQPTSTSSTTATATTTTTPQTLISTDKRAQVFFNTGIVLMASG
KYELAFSCLQESCILLRCSPLVWLRLAECCILAHQNKLKDKLSQSDNSTTDDDNSNNNID
GSIEKDNEKDTSEKDNIRYRQSQTQTQTQTQSQSQSQSQSQSQSQSQSQTQTQSQPQQTQ
QHQQQQPQQQPPQQQSQSQPEVNDNFESNIEKIKGKEDEEDEEELIFGRIKILNDSILLP
IVSGLHKGLQIGDSDVVQSSLSASDDMEESLSRLGTLSLDFANKCLRNAHYLEKLILQKK
SERNQSKNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNQNNEDREMENEDELFQEYHNDLL
LSILASQAYVSLCTRNPILALSASQQILNIYSQNEINNKNSTTTTSTTTTTTTTTIPINP
KYKYYAHLYATEACLFLNLQKQAIQFLSLDFIQQLQQQHQQYQQQQQQQQQQQHTSLALD
LESSSTLYLNLAIAHLINNDFESAEISIQQLQSYLVNQYNQYHNFYSQNQQMIQLQQLYE
ISKKINLLKVYIELRKGNTENALNIILSGRPSPN
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagaacaagtttatcaaaaagcatatgaatgctttcaaagaaaagaatttgaa
caatctttaaaattattaaaagagatcaaagaaaagaaccaatatcaatctactgtagag
attcaaatgaatatattagttgcagaattttataatagaaattgtttaaatcatttaaaa
ttaattgaagatttaaatcagttattaaaatcattagtaacaaataaacaacatcaacca
caacaacaaccatcacaagacaattcatcaccaatattatcatcaacatcaataacatca
ccaccaccaccaaccattggtttagattcacagccacaatcaacaacaacaacaacatca
acatcaacaacatcaacaacatcaacaacatcaacaacacaaacacaaacaattaatgat
ttacttgacaatgaacaagcattaatattatataatcaagcagttatttattttaatatt
aaacaacatggatcaagttataaaatattagaacaacttttttcacaggttttatctttt
gatgactttttaggcattagaatttgtttactctttataaatgttacaatagaaggtcaa
ctttatgataaggcatattctattttactttttttagataaatcttttgaccattttttt
tatattagtggcgataatgaacaaacaaataacaataactatcaaaatacacaaatgact
ccaactgaatttaaatttttaattcatttttataaatctaaaatttatttattatccaat
ttacattatttaaaagcatatgaagatattgaaaaagcattagaattaagtttaaagatt
gactattcaccattaataggatcatgtaattcattaaaagcaaattactttagtatgaaa
ttagatacacaaaatacaataaaacatttattatcatcaaatatatcatcaacaacaaca
acaacaacaacaacaacaaactcaatagtaaaatcatcactttcatttggtaatgattta
attatggagtcaataacaccaggtatcttttataataatattggttcattacattttaat
attcaagattatacattagcaaattattatttttcaaagtcattaaaagaaacacaacca
acttcaacttcttcaacaactgccacagcaaccacaaccacaacaccacaaacattaata
tcaacggataaaagagctcaagtattttttaatacaggtatagttttaatggcaagtgga
aagtatgaattagctttctcttgtcttcaagaatcttgtattttattaagatgtagtcct
ttggtttggttaagattagctgaatgttgtatattagcacatcaaaataaattaaaggat
aaattatcacaatcagataattctactactgatgatgataatagtaataataatattgat
ggttctatagaaaaagataatgaaaaggatactagcgaaaaggataatattagatatagg
caatcacaaacacaaacacaaacacaaacacaatcacaatcacaatcacaatcacaatca
caatcacaatcacaatcacaatcacaaacacaaacacaatctcaacctcaacaaactcaa
caacatcaacaacaacaaccacaacaacaaccaccacaacaacaatcacaatcacaacct
gaagttaatgataactttgaaagtaatatagagaaaattaaaggaaaagaggatgaagaa
gatgaagaagaattaatttttggtagaattaaaattttaaatgattctattttattacca
atcgtaagtggtcttcataaaggtcttcaaattggtgatagtgatgttgttcaatctagt
ctttcagcttctgatgatatggaagagtctttaagtagacttggtactttatcactagac
tttgcaaataaatgtttaagaaatgctcattacttggaaaaattaattttacaaaaaaag
tctgaaagaaatcaatcaaaaaataataataataataataataataataataataataat
aataataataataataataataataataataataataataataataataatcaaaataat
gaagatagagaaatggaaaatgaagatgaattatttcaagaatatcataatgatttatta
ttatcaattttagcatcacaagcatatgtttcactttgtacacgtaaccctattttagca
ttatcggcatctcaacaaattttgaatatttattcacagaatgaaattaataataaaaat
tcaacaacaacaacatcaacaacaacaacaacaacaactacaacgataccaattaatccg
aaatataaatattatgcacatttatatgcaaccgaagcatgtttatttttaaatttacaa
aaacaagcaattcaatttctatctttagattttattcaacaattacaacaacaacatcaa
caatatcaacaacaacagcaacaacaacagcaacaacaacatacatctttagcattggat
ttggaatcatctagtacactttatttaaatctggcaatagctcatttaattaataatgat
tttgaaagtgcagagatatcaatccaacagttacaatcttatttggtaaatcaatacaac
caatatcataatttttatagtcaaaatcaacaaatgattcaattgcaacaactatatgaa
atttcaaaaaaaattaatttattaaaagtttatatcgagttaagaaaaggaaatacagaa
aatgcattaaatataattttaagtggaagaccttctccaaattaa
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