Dictyostelium discoideum (cellular slime mold): DDB_G0281925
Help
Entry
DDB_G0281925 CDS
T00245
Name
(RefSeq) DEAD/DEAH box helicase
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Pathway
ddi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
DDB_G0281925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ddi03041
]
DDB_G0281925
03009 Ribosome biogenesis [BR:
ddi03009
]
DDB_G0281925
Enzymes [BR:
ddi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DDB_G0281925
Spliceosome [BR:
ddi03041
]
Complex A
U1 snRNP components
U1 related factors
DDB_G0281925
Complex B
DDB_G0281925
Ribosome biogenesis [BR:
ddi03009
]
Eukaryotic type
Pre-60S particles
Helicases
DDB_G0281925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Astro_VPg
Motif
Other DBs
NCBI-GeneID:
8623317
NCBI-ProteinID:
XP_640502
dictyBase:
DDB_G0281925
UniProt:
Q54T87
LinkDB
All DBs
Position
3:complement(5132437..5134280)
Genome browser
AA seq
586 aa
AA seq
DB search
MPSTSSKRKTEDESLEVKVEQSSSKKLKMSKRDESSDESSSSDSEVESKSKSIKKSSKSE
EKKSEKKSSSSKEDKEEEVKEETKEDIVLSPTEWRKKHNVLIEGKSQPNPFQKFTDYEFP
RMFQHIFQGFTAPTVIQGQSWPIILGGNDLVGLAATGSGKTLAFLLPALLKIISLPKRPS
YGATPLVLVMAPTRELAQQIEEVCKTSIRGTSIRQLCAYGGLGKIDQSRILRNGVDIVIG
TPGRLNDLLRKHHLSSVQYLVLDEADRMLDMGFMPQIESLIDQIPKERQTLMFSATWPKE
VKLLASKFLKDPIKITVGSQELTGSINVTQHIVNIDDLSDLQSDDLIYDEINKILTADPT
NTVIVFCNEKYKCDDFQHYLSTQKNVKSIVLHSGKDQRMRESGLKLFRDHRIRILIATDV
AARGLDIPSVKAVFNYRLPGNIEDYVHRIGRTGRAGKTGDAWSYVTTQTPNLRDLVKILQ
RTNQKIPDFLEKFAVHSRQGISRYGGGGRGGRGGGRSWGNNRNGGGGGGGSWGNRNGGGG
GGNWGNNRNGGGGGGSWGNRNGGGGGYGNNGGSNWGSGNGGSEGSW
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgccttcaacatcaagtaaaagaaaaacagaagatgaaagtttagaagttaaagttgaa
caatcaagttcaaaaaaattaaaaatgagtaaacgtgacgaatcatcagacgaatcatca
tcatcagactcagaagttgaatcaaaatcaaaatcaattaaaaagtccagtaaatctgaa
gaaaagaaatctgaaaagaaatcatcatcatcaaaagaggataaagaagaagaagttaaa
gaagaaaccaaagaagatattgttttaagtccaactgaatggagaaagaaacataatgtt
ttaattgagggtaaatcacaaccaaacccattccaaaagtttacagattatgaattccca
cgaatgtttcaacatattttccaaggatttacagcaccaactgttattcaaggtcaaagt
tggccaattattttaggaggtaatgatttggttggtttagcagcaactggttcaggtaaa
acattggcattcttattaccagcattattaaagatcatttcacttccaaaacgtccatcc
tacggtgccaccccattggtactcgttatggcaccaactagagagttggcacaacaaatc
gaagaagtctgtaaaacatcaattcgtggtacttcaattcgtcaactttgcgcctatggt
ggtttaggtaaaatcgatcaatccagaatcttacgtaatggtgtagacattgtcatcggt
acaccaggtcgtctcaatgatctcttgagaaaacatcatttatcatctgttcaatattta
gttctcgatgaagccgatcgtatgttggatatgggtttcatgcctcaaattgaatcactc
attgatcaaattccaaaagaacgtcaaacactcatgttttctgcaacttggccaaaagaa
gtcaaattactcgcttcaaaattcttaaaagatccaattaaaatcaccgttggtagtcaa
gaattaactggttcaatcaatgtaactcaacatattgtcaatattgatgatttatccgat
ctccaatctgatgatctcatttatgatgaaattaataaaattctcaccgctgatccaaca
aatactgtcattgttttctgtaatgaaaaatataaatgtgatgatttccaacattattta
tcaactcaaaaaaatgttaaatcaattgttttacatagtggaaaagatcaacgtatgcgt
gaatctggtcttaaactttttagagatcatagaattcgtattttaattgcaacagatgtt
gctgctcgtggtcttgatattccatcagttaaagctgtattcaattatcgtttaccaggt
aacattgaagattacgtacatcgtattggtagaactggaagagctggaaagaccggtgac
gcttggtcttatgttactacccaaacaccaaacctccgtgatttagttaaaattttacaa
agaaccaatcaaaagatcccagatttcttagagaaattcgctgttcactcaagacaaggt
atctctagatatggtggtggtggtcgtggtggtagaggtggtggccgtagctggggtaat
aacagaaatggtggtggtggcggcggtggtagctggggtaatagaaatggtggtggcggt
ggtggtaactggggtaataatagaaatggtggtggcggcggtggtagctggggtaataga
aatggtggtggtggtggttatggtaataatggtggtagtaattggggtagtggaaatggt
ggaagtgaaggttcatggtaa
DBGET
integrated database retrieval system
