Dictyostelium discoideum (cellular slime mold): DDB_G0282045
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Entry
DDB_G0282045 CDS
T00245
Symbol
vps36
Name
(RefSeq) vacuolar protein sorting 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Pathway
ddi04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
DDB_G0282045 (vps36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ddi04131
]
DDB_G0282045 (vps36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ddi04147
]
DDB_G0282045 (vps36)
Membrane trafficking [BR:
ddi04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
DDB_G0282045 (vps36)
Exosome [BR:
ddi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
DDB_G0282045 (vps36)
Exosomal proteins of colorectal cancer cells
DDB_G0282045 (vps36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
PH-GRAM_MTMR6-like
Motif
Other DBs
NCBI-GeneID:
8623388
NCBI-ProteinID:
XP_640433
dictyBase:
DDB_G0282045
UniProt:
Q54T18
LinkDB
All DBs
Position
3:complement(5326311..5328458)
Genome browser
AA seq
611 aa
AA seq
DB search
METLFQKTRVINGEPELIQNESIIYKVDNVSIYDGDQKTQYSNGTVMLSTHRVIWVNKDI
GLGLLHQLILNIEALTTGLMGIGSSPKILITLTKRSFRLSFHAGRRDDFLKLYRQSLLNK
PSQSPSPTSSTSQFINQPNNNNNNYNNNNSYQTPLQPPQYQQQQKEQQQQYNSYNPYQQQ
SSQSPQQPQQQYNSYNPYQSYVQQQQQQQQQQQQQQQQQQIPQYQQQTSPPPPNYYEHIQ
QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHQQQQRQQSPSLYNSYHSTQQ
PLPPPSYLQHMQQQQQQSPSPSPQYQQTNSNSLPSQPPQPNYNLQNFINTPIISNNSNNN
NTNINGFTSNAGIGGIINQMNKKTLENDKLLSESFSDLNILMEKAKDMVTLSEKLKVTLE
KKTGTSTSTEEEEEFRSFLLEMGIESPVTKKTAKSKYHDQLSKQLSDWIITKNILKQHKG
SGNNEMITLSDLYCIFNRARGIELISPDDLYRACLLFESLDLPLRLRKFDSGVIVVQSKD
ENDEQIAKQILDIINENGPLSAFDLAKINSISLHLAKDQLLVGVTSEKLGKLCRDETVEG
NILYHINIFVD
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggagacactatttcaaaaaacaagggtcatcaatggagaaccagaattaatacaaaat
gaatctataatatataaagttgataatgtttcaatatatgatggtgaccaaaaaactcaa
tattcaaatggtacagttatgttaagtactcatagagttatttgggttaataaagatatt
ggattaggattattacatcaacttattttaaatattgaagcattaactacaggattaatg
ggtataggatcaagtccaaaaattttaataactttaacaaaacgttcatttagattatca
ttccatgctggaagaagagatgattttttaaaattatacagacaatctttattaaataaa
ccttctcaatcaccatcaccaacatcatcaacatcacaatttataaatcaaccaaataat
aataataataattataataataataattcataccaaacaccattacaaccaccacaatat
caacaacaacaaaaagaacaacaacaacaatataattcatacaacccatatcaacaacaa
tcatcacaatcgcctcaacaacctcaacaacaatataattcatataatccatatcaatca
tatgttcaacaacagcagcaacaacagcagcaacaacaacaacaacaacaacaacagcaa
atacctcaatatcaacaacaaacatcaccaccaccaccaaattattatgaacatatacaa
caacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaa
caacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacat
cagcagcagcaacgacaacaatcaccatcattatataatagttatcattctactcaacaa
cctttaccaccaccaagttacttacagcatatgcaacaacaacaacaacaatctccatca
ccatcaccacaatatcaacaaacaaattcaaattcattaccatcacaaccccctcaacca
aattataatttacaaaattttataaatactccaattatttcaaacaacagtaataataat
aatacaaatataaatggttttacatcaaatgctggtataggtggtattataaatcaaatg
aataaaaaaacattagaaaatgataaattattatcagaatcattttcagatttaaatatt
ttaatggaaaaagccaaagatatggttactttatctgaaaaattaaaagttacattggaa
aagaagactggtacttcaacttcaactgaagaagaagaagaatttagatcatttttatta
gagatgggcattgaaagtcctgttacaaaaaaaacagcaaaatcaaaatatcatgatcaa
ttatcaaaacaattatcagattggataattacaaagaatattttaaaacaacataaaggt
agtggtaataatgaaatgattacattatcagatttgtattgtatttttaatagagctaga
ggtatagaattaatttcaccagatgatttatatagggcatgtttattatttgaatcattg
gatttacctttaagattacgtaaatttgatagtggtgttattgtggttcaatcaaaagat
gaaaatgatgaacaaatagctaaacaaattttagatatcattaatgaaaatggtccacta
tctgcttttgatttggctaaaattaattcaatctctttacatttagctaaagatcaatta
ttggtaggtgttacaagcgaaaaattaggaaaattatgtagagatgaaactgtggaaggt
aatatattataccacataaatatatttgttgattaa
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