Dictyostelium discoideum (cellular slime mold): DDB_G0282529
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Entry
DDB_G0282529 CDS
T00245
Symbol
rbbD
Name
(RefSeq) WD-40 repeat-containing protein
KO
K10752
histone-binding protein RBBP4
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Pathway
ddi03082
ATP-dependent chromatin remodeling
ddi03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
DDB_G0282529 (rbbD)
03083 Polycomb repressive complex
DDB_G0282529 (rbbD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ddi03036
]
DDB_G0282529 (rbbD)
Chromosome and associated proteins [BR:
ddi03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
DDB_G0282529 (rbbD)
Histone modification proteins
HAT complexes
HATB complex
DDB_G0282529 (rbbD)
HDAC complexes
Sin3A-HDAC complex
DDB_G0282529 (rbbD)
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
DDB_G0282529 (rbbD)
PRC2.2
DDB_G0282529 (rbbD)
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
DDB_G0282529 (rbbD)
Heterochromatin formation proteins
Other heterochromatin formation proteins
DDB_G0282529 (rbbD)
Chromatin remodeling factors
NuRD complex
DDB_G0282529 (rbbD)
NuRF complex
DDB_G0282529 (rbbD)
NuRF complex (fruit fly)
DDB_G0282529 (rbbD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_WDR75_1st
WD40_WDHD1_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD_LRWD1
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
eIF2A
ANAPC4_WD40
Beta-prop_SCAP
NBCH_WD40
Beta-prop_NUP159_NUP214
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
8623636
NCBI-ProteinID:
XP_640105
dictyBase:
DDB_G0282529
UniProt:
Q54SD4
LinkDB
All DBs
Position
3:complement(5888997..5890360)
Genome browser
AA seq
423 aa
AA seq
DB search
MTTQMEDVEEKVINEEYKIWKRHTPFLYDMVITHALEWPSLTVAWLPVKTSQPNKPYSIE
KVILGTHTSDEEQNYLMVAKVHLPVDEASIESLKYDDTKGEVGGIGNVSEKIEIIQKINH
EGEVNRARVMPQNHSIIATKTVSSEVYIFDTTKHPLEPTPDGKCSPNLKLTGHKKEGYGI
SWNPRKEGHLLSCSDDQSICMWDISAASKSDSTLDALNIYNGHTSIVEDVAWHYIHDTFF
GSVGDDKKLMIWDTRTGTKPIHVVEAHNSEVNCLSFNPFCEFLVATGSTDKTVALWDMRN
LGNRLHSLISHTDEVFQVQFSPHNETVLASCGSDRRVNVWDLSRIGEEQNNEDAADGPPE
LLFIHGGHTSKISDFSWNPNDPWSIASVAEDNILQIWQMAENIYNDREDDLENSKVTNAQ
IGE
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgacaacacaaatggaagatgttgaagaaaaagttattaatgaagaatataaaatttgg
aaaagacatacaccatttctttatgatatggttataactcatgcacttgagtggccatca
cttacagttgcatggctacctgtaaaaacatcacaaccaaataaaccatatagtattgaa
aaagttattttaggtacacatacatcagatgaagaacaaaattatttaatggtagcaaaa
gttcatttaccagttgacgaagcttcaattgaatctttaaaatatgatgatactaaaggt
gaggttggtggtattggtaatgtttcagaaaaaattgaaattattcaaaagattaatcat
gaaggtgaagttaatagggcaagagttatgccacaaaatcatagtattatagcaactaaa
acagtatcatcagaggtttatatatttgatacaaccaaacatccattggaaccaacacct
gatggtaaatgttcaccaaatttaaagttaacaggtcataagaaagaaggttatggtata
agttggaatccaagaaaggaaggtcatcttttgagttgttcagatgatcaatcaatttgt
atgtgggatatttcagcagcatcaaaatcagattccactttggatgcattaaacatttac
aatggtcatacatcaattgttgaagatgtagcatggcattatattcacgatacatttttt
ggatcagtaggcgatgataagaaacttatgatttgggatactcgtactggaacaaaacca
attcacgttgttgaagcacataatagcgaagtcaattgtttatcattcaatccattttgt
gagtttttagttgcaactggttcaaccgataagaccgttgctctttgggatatgcgtaat
ttaggtaatcgtcttcattctttaatctctcatactgatgaagtgtttcaagttcaattt
tcaccacataatgaaacggttttggcaagttgtggttctgatcgtcgtgtaaacgtttgg
gatctctctagaataggtgaagaacaaaacaatgaagatgctgccgatggtccaccagaa
cttttattcattcatggtggtcatactagtaaaatttcagacttttcttggaatccaaat
gatccttggtcaattgcttccgttgctgaagataatattcttcaaatttggcaaatggct
gaaaatatttataatgatcgtgaagatgatcttgaaaatagtaaagttacaaatgctcaa
attggtgaatga
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