KEGG   Dictyostelium discoideum (cellular slime mold): DDB_G0282763
Entry
DDB_G0282763      CDS       T00245                                 
Symbol
spf27
Name
(RefSeq) spliceosome-associated protein
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
ddi  Dictyostelium discoideum (cellular slime mold)
Pathway
ddi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ddi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    DDB_G0282763 (spf27)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ddi03041]
    DDB_G0282763 (spf27)
   03400 DNA repair and recombination proteins [BR:ddi03400]
    DDB_G0282763 (spf27)
Spliceosome [BR:ddi03041]
 Complex B
  Other components
   Prp19 complex
    DDB_G0282763 (spf27)
 Complex C
   Prp19-CDC5 complex
    DDB_G0282763 (spf27)
DNA repair and recombination proteins [BR:ddi03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    DDB_G0282763 (spf27)
SSDB
Motif
Pfam: BCAS2 DUF4019
Other DBs
NCBI-GeneID: 8623601
NCBI-ProteinID: XP_640072
dictyBase: DDB_G0282763
UniProt: Q54SG7
LinkDB
Position
3:complement(5822824..5823706)
AA seq 226 aa
MNIIIEGAENIDSLPYVDDSVNENEQELINKLISDEMSTFTPPDYLAQLPSFIDIDYNNF
QFLENDFKRMEKEEKMKEFDIGRYKVEPTTTMIKQQLNEKQWNDSLNNARSQLEHQDIRK
INLELLQRYGGNSWKLYLSDLEILQKTLKKQLDQKKQQIEEINIQRKLSQEQTFEKIQQH
DKKFLELVYKNTEIESACKSIELEIEQLKLKQQLQQQQENGDLNNK
NT seq 681 nt   +upstreamnt  +downstreamnt
atgaacataattatagaaggagcagagaatattgattcattaccatatgttgatgattca
gttaatgaaaatgaacaagaacttataaataaattaattagtgatgaaatgtcaacattt
acaccaccagattatttagcacaattaccatcatttatagatatagattataataatttt
caatttttagaaaatgattttaaaagaatggaaaaagaagaaaagatgaaagaatttgat
attggtagatataaagttgaaccgacaacaacaatgataaaacaacaattaaatgagaaa
caatggaatgatagtttaaataatgcgagatcacaattggaacatcaagatataagaaag
attaatttagagttattacaacgttacggtggtaacagttggaaattatatttatcagat
ttagagatacttcaaaagacattaaagaaacaattggatcaaaagaaacaacaaatcgaa
gaaatcaacattcaaagaaagttatcacaagaacaaacctttgaaaagattcaacaacat
gataaaaagtttttagaattagtttataaaaatactgaaatcgaatcagcttgtaaaagt
attgaattggaaattgaacaactaaaattaaaacaacaattacaacaacaacaagaaaat
ggtgatttaaataataaataa

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