Dictyostelium discoideum (cellular slime mold): DDB_G0283061
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Entry
DDB_G0283061 CDS
T00245
Name
(RefSeq) hypothetical protein
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ddi03016
]
DDB_G0283061
Enzymes [BR:
ddi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
DDB_G0283061
Transfer RNA biogenesis [BR:
ddi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DDB_G0283061
Prokaryotic type
DDB_G0283061
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
TFIIA
Spt20_SEP
DUF3850
P22_portal
Usp
Motif
Other DBs
NCBI-GeneID:
8623854
NCBI-ProteinID:
XP_639285
dictyBase:
DDB_G0283061
UniProt:
Q54RR6
LinkDB
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Position
4:complement(<69391..>70422)
Genome browser
AA seq
343 aa
AA seq
DB search
MSPRYKIIYEYIGKSFTGFQRLKYPVVKLPVQQVLEDSLEKIHGYKIPIVGSSRTDHGVS
AVGQVSHFDVKTRTSKSGIEMPLLSPEELTMAINYNVGKEYLKSIRIIKTEIVDDKFHCR
FNATSRTYLYRVMANCGRKQIPLELLDRVYLVGPILNLDEMRKASEMFIGTHDFSSFRSA
KCSSTRPIRSISHIKIYDLPLPDIFQYNPSFQNISRSNTNYPIGDGEKNLDKKNTGLQYF
GIEIKARAFLHNQVRIMVASLIKVGEGEISIQQLEEIKDKKDRGAAPPTASPEPLTLLTV
SYDDPKVNPSTFQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQS
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccaagatataagattatatatgaatatattggtaaatcatttactggatttcaa
cgattaaagtatccagttgtaaaattaccagttcaacaagtattagaagattcattagag
aaaattcatggttataaaataccaattgttgggtcaagtagaacagatcatggtgttagt
gcagttggacaagtttcacattttgatgttaaaactcgtacatcaaaaagtggtattgaa
atgccactattatcaccagaagaattaacaatggcaataaattataatgttggtaaagaa
tatttaaaatcaattagaattataaaaacagagattgttgatgacaaatttcattgtaga
tttaatgcaacctctagaacctatctctatagagtaatggcaaattgtgggagaaaacaa
attccattggaattattggatagagtatatctggttggtcccattttaaatcttgatgaa
atgagaaaagcttcggaaatgttcattggtactcatgatttctcaagttttaggagtgca
aaatgttcatccactagaccaattagatcaatttctcatattaaaatttatgatttacca
ttaccagatatttttcaatataatccatcttttcaaaatatttcaagatcaaatacaaat
tatccaattggtgatggtgaaaagaatctagataaaaaaaatacaggtttacaatatttt
ggtatagaaattaaagctagagctttccttcataatcaagttagaattatggttgcttcc
ttaattaaagttggtgaaggagaaatttcaattcaacaattggaagaaattaaagataaa
aaagatagaggtgctgctcctccaactgcttctccagaacctttaacattattaactgta
tcatatgatgatccaaaagttaatccttctacttttcaacaacaacaacaacaacaacaa
caacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaa
caacaatcttaa
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