Dictyostelium discoideum (cellular slime mold): DDB_G0283307
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Entry
DDB_G0283307 CDS
T00245
Symbol
prpf39
Name
(RefSeq) pre-mRNA processing factor 39
KO
K13217
pre-mRNA-processing factor 39
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ddi03041
]
DDB_G0283307 (prpf39)
Spliceosome [BR:
ddi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
DDB_G0283307 (prpf39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
HAT_Syf1_CNRKL1_N
ARM_TT21_5th
TPR_19
TPR_CcmH_CycH
Mrr_N
DUF7103
SPG48
Mad3_BUB1_I
SKG6
Motif
Other DBs
NCBI-GeneID:
8624026
NCBI-ProteinID:
XP_639156
dictyBase:
DDB_G0283307
UniProt:
Q54R91
LinkDB
All DBs
Position
4:complement(508620..510972)
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AA seq
699 aa
AA seq
DB search
MTEVTTTPPTTSTPTTSPQNLSEEDKLWKIVQTNPLAFNQWTFLIGVIEKTNDIEKIRKV
YSEFLNEFPLCFLYWKRFADHEYAHNNTTQSIEIFEKAVSSIPHSVDIWLNYCTHLIDKS
YPVDEIRSVFKRGINIIGTDYQSGKFWEKYIEFEMGQENNELASIFNSILKTPLENLQIF
NEKFKDNIDRIKINDMLTEEERKEYTGYDAETKQMVLQNREKWYHETLEKISKRSNFESI
VNKRFFFHIQPIDEMTLSVWRSYFNYMESDPSVTQEEVIKLFERCLVPCCYYSEFWLKYI
KFLQESYVGDNKNELIESIFERATKIFLKKRADIHLEYSLFVESTLGNIEKAFSILENIH
SLLPTHLEVILRLVSFKRRNHSIQQANQFFKKVLTSLQSDSKTYPFLSINYISFLLSNKQ
SLQGEKEGEEEADKIVDVFETSREVLKKSISLYPDSKLLWLYFINFEINNLLFIISGSGS
SEKRIEQIERIKKVYNIALCLDKNKIKNNGKENKEENKEENKENTNNEEKEKEKDDEEKD
DEEKDGNEILVCKLNDDEKLNIWNDYLEFNLQYDNDIKGYKELKNKFESLYPDGKPESKK
RSLTDMNLQSSSSSSSSTTNGIINNGNNDGPLNKRVAYSVPPTSNNNGVIQNNSYIYQQQ
QAQPQHHHQQQQHHHQQHIQQQQQHHQQQHQGFYGGYGY
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgactgaagtaacaacaactccaccaacaacatcaacaccaacaacttcaccacaaaat
ttaagtgaagaagataaactttggaaaattgttcaaactaatccattggcatttaatcaa
tggacatttttaattggtgtaatagagaaaactaatgatattgaaaagattagaaaagtg
tatagtgaatttttaaatgaatttccattatgttttttatattggaaaagatttgcagat
catgagtatgctcataataatacaactcaatcaattgaaatatttgaaaaagcagtatca
tcaattccacatagtgttgatatttggttaaattattgtactcatttaattgataaatct
tatccagttgatgaaattagaagtgtatttaaaagaggcattaatattattggtacagat
tatcaaagtggtaaattttgggaaaaatatattgaatttgaaatgggacaagagaataat
gaattagcatcaatatttaatagtattttaaagacaccattagagaatttacaaattttt
aatgaaaaatttaaagataatatcgatagaattaaaattaatgatatgttaacagaagaa
gaaagaaaagaatacactggttatgatgctgaaactaaacaaatggtcttacaaaataga
gagaaatggtatcatgaaactttagaaaaaatttcaaaaagatcaaattttgaatcaatt
gtaaataaaagattcttctttcatattcaaccaattgatgaaatgacattatcagtatgg
agatcatatttcaattatatggaatctgatccatctgtaactcaagaggaagttattaaa
ctttttgaaagatgtttagtaccatgttgttattattcagaattttggttaaaatatatt
aaatttttacaagaaagttatgttggagataataagaatgaattaattgaatcaatattt
gagagagcgacaaagatattcttaaaaaagagagctgatattcatttggagtattcatta
ttcgtagagtcaacattgggtaatattgaaaaggcattttcaattttggagaatatacat
tcattattaccaactcatttagaggtgattttaagattggtttcatttaaacgtagaaat
cattcaattcaacaagcaaatcaattctttaaaaaggttctaacaagtttacaatctgat
tccaagacttatcctttcttatctataaattatatttcatttttattatcaaataaacaa
tcattacaaggtgaaaaagaaggtgaagaggaagctgataaaattgttgacgtttttgaa
acatcaagagaggttttaaagaaatcaatttcactttatccagattcaaaattattatgg
ttatattttataaattttgaaattaataatttattatttattataagtggcagtggtagt
agtgaaaaaagaattgaacaaattgaaagaattaaaaaagtttataatattgcattatgt
ttagataaaaataaaattaaaaataatggtaaagaaaataaagaagaaaataaagaagaa
aataaagaaaatactaataatgaagaaaaagaaaaagaaaaagatgatgaagaaaaagat
gatgaagaaaaggatggaaatgaaattttagtttgtaaattaaatgatgatgaaaaattg
aatatttggaatgactatttagaatttaatttacaatatgataatgatattaaaggttat
aaagagttaaagaataaatttgaaagtttatatcctgatggtaaaccagaatcaaagaaa
agatcactaaccgatatgaatttacaatcatcatcgtcatcatcatcatcaacaacaaat
ggtattattaataatggtaataatgatggtccactaaataaaagagttgcttattctgta
ccaccaacttcaaataataatggtgtaattcaaaataatagttatatttatcagcaacaa
caagctcaaccacaacatcaccatcaacaacaacaacatcaccatcaacaacacatacaa
caacaacaacaacatcaccaacaacaacatcaaggtttttatggtggatatggttattaa
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