Dictyostelium discoideum (cellular slime mold): DDB_G0283769
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Entry
DDB_G0283769 CDS
T00245
Symbol
HBS1
Name
(RefSeq) hypothetical protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Pathway
ddi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
DDB_G0283769 (HBS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ddi03019
]
DDB_G0283769 (HBS1)
Messenger RNA biogenesis [BR:
ddi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
DDB_G0283769 (HBS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
MMR_HSR1
GTP_EFTU_D2
CUE
HBS1_N
GTP_EFTU_D4
Sigma70_ner
Motif
Other DBs
NCBI-GeneID:
8624279
NCBI-ProteinID:
XP_638881
dictyBase:
DDB_G0283769
UniProt:
Q54QJ0
LinkDB
All DBs
Position
4:1138835..1141696
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AA seq
729 aa
AA seq
DB search
MSRHRFLKNMDGDDFEDFKEEDDLGEYDDEVYDVYDVVVEKFPDITYPEIEKVLMDFDYN
VDDAIDFILNGGLNNKGKKKNNKKPPQAVNIINNNNNNKKSEPVNTNKSTSKGQRRPRKS
TSENNNSNNNSNNNDDDDDNNKNKNNNNNNKNNNGYKPSSLAQDLSAITNTISNIKIIND
KEFSFQSLYKNNKDNVTNSLKTLSIGGNNNNKVPVESKTPYNTPIGTPINDKNLPHSPKE
SLIDSINATTVNKNLNVKQHSINRKKELEEMVHVAFSSSDNKPHLNMVVIGHVDAGKSTT
MGHILFKLGYVDKRTMSKFENESNRMGKSSFHFAWVLDEQEEERERGVTMDVCVRYFETE
HRRITLLDAPGHRDFIPNMISGTTQADVAILLINASEFEAGFSAEGQTKEHALLAKSLGI
MELIVAVNKMDSIEWDQSRYDYIVETIKTFLVHAKFNEKNIRFIPISGFTGENLIDRQES
KLLKWYDSKQPTLIECIDSFSVGERLLNKPFRMNISDVYKSSSKGYVAVGGKIEAGLLGN
GDKILISPGNDICTIKSIRRNNLESEWAVGGDNVDLSLVVENPSILRVGCILSDPEKPIP
LSKRFIAQIVTFTLPIPMTNGYQVVFHAHSMEEPATITRLISLLDSNGAVSKKNPRCISD
TCTALVEITLGRLSCLELYSSYRQLGRFTLRNGGVTIAAGLITEFYDNPPKKSSSSPLTT
TTTTTSNKK
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagacatagatttttaaagaatatggatggtgatgactttgaagattttaaagag
gaagatgaccttggagaatatgatgatgaagtctatgatgtttatgatgtagttgttgaa
aaattccccgatattacatatccagagattgaaaaagttttaatggattttgattacaat
gttgatgatgcaattgattttatattaaatgggggtttaaataataaaggaaagaaaaaa
aataataaaaaaccaccacaagcagttaatattattaacaacaacaacaataataaaaaa
tcggaaccagtaaacacaaataaatcaacttcaaaaggtcaaagacgaccaagaaaatcc
acatcagaaaataataatagtaataataatagtaataataacgatgatgatgatgataat
aataaaaataaaaataataataataataataaaaataataatggatataaaccgtcatct
ttagcacaagatttatcagctatcacaaatacaatatctaatattaaaataatcaatgat
aaggagttttcatttcaatcactttataaaaataataaggataatgtaacaaattcatta
aaaacattatcaattggtggaaataacaataataaagtaccagttgaatcaaaaacacca
tacaatacaccaataggaacaccaattaatgataaaaatttaccacattcaccaaaagaa
tcattaattgattcaataaatgcaacaacagttaataaaaatttaaatgtaaaacaacat
agtataaatagaaagaaagaattagaagagatggtacatgttgcattttcaagtagtgat
aataaaccacatttgaatatggtagtgattggacatgttgatgcaggtaaaagtacaaca
atgggacatatattatttaagttgggatatgtagataagagaaccatgtcaaagtttgaa
aatgagtcaaatagaatgggtaaatcatcatttcatttcgcatgggtattggatgaacaa
gaggaagaacgtgagcgtggtgtaactatggatgtttgtgtgcgttactttgaaacagag
catagaagaatcacactattggacgcaccaggtcacagagatttcataccaaatatgatc
agtggtacaactcaagcagatgttgcaatattattaattaacgcatcagaatttgaagca
ggtttctcagcggagggtcaaactaaagaacatgctttactcgcaaaatcattaggtatc
atggaattaattgtagcagtcaataaaatggattcaatcgaatgggatcaatcacgttac
gattacattgtagaaaccattaaaacctttttagttcatgcaaaattcaacgagaagaac
attagattcataccaatttccggtttcacaggtgagaatttaatcgatcgtcaagaatca
aaacttttgaaatggtatgatagcaaacaacctacccttatagagtgtatcgactcattt
agtgttggtgaacgtttattgaataaaccattcagaatgaacattagtgacgtatataaa
tcatcaagtaaaggttacgttgcagttggtggaaagattgaagctggtttattgggtaat
ggtgataagattttaatttcacctggtaatgatatttgtacaattaaatccattcgtaga
aataatctcgagtctgaatgggcagtcggtggtgataatgttgatttatcattggtcgta
gagaatccttcaattttacgtgttggttgtatccttagtgatccagaaaaaccaatacct
ctatcaaaacgtttcatcgctcaaatcgtcactttcactctaccaatcccaatgaccaat
ggttatcaagtggttttccatgctcactcaatggaagaacctgcaaccattacacgttta
attagtttattggattcaaatggtgccgtttcaaaaaagaatccaagatgtatttctgat
acttgtactgctttagtagaaattacattgggtagattatcttgtttagaactctatagt
tcctatagacaattaggtagattcactttaagaaatggtggtgttacaattgctgctggt
ttaatcactgaattttatgataatccacctaaaaaatcttcttcatcacctttaacaact
acaacaacaacaacatcaaataaaaaataa
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