KEGG   Dictyostelium discoideum (cellular slime mold): DDB_G0284195
Entry
DDB_G0284195      CDS       T00245                                 
Name
(RefSeq) hypothetical protein
  KO
K15180  negative elongation factor B
Organism
ddi  Dictyostelium discoideum (cellular slime mold)
Pathway
ddi03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:ddi00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    DDB_G0284195
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ddi03021]
    DDB_G0284195
Transcription machinery [BR:ddi03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    NELF complex
     DDB_G0284195
SSDB
Motif
Pfam: COBRA1
Other DBs
NCBI-GeneID: 8624468
NCBI-ProteinID: XP_638637
dictyBase: DDB_G0284195
UniProt: Q54Q08
LinkDB
Position
4:complement(1676837..1679614)
AA seq 854 aa
MEEFLIGNLGSEKILTSLSTTTYPLQFISQFQQENGISKKSLPTVSPVLNLLDLHQIPRG
DLYLNLLSSLKKDLLLKINTLNKHELEKLLEQTFPYIGFEELQEIPMNVMKRLTPEVPVA
FLLKLAEAEELYEQCPIEVKRQIWIVNEELFKEKIKPLINQYIEDPIFIQDMNEQLLLSS
STTVDPLFAVSHLPAKRRENNSVLQEMVELFGTKSPDLYQMFINQIKRSFADSGNYLLCN
LRAEILMAIHDKSIPEIYDTDASHNIAWCLDACIRDNTLDARRIKEIQTNLSSSVHHQNS
STLGDTAMVFANPIAVNCIVRNILIQLKEVVKRKQIPKDDESIKFLTYLLVLALKSHEMI
KESKFKIPHVKKHILQTFYPLLATQILDDITREQTSTISLSSSSTSNTSSTNPANTISSN
LNSSSSTVIKDISSGGGSSVNSGGNSGNNSGGGTGNNTIGTNINKSSNNLLSMSSSTSPV
LESTSLMSVSEFQDLENCYLKYEVCKKITLSYIINRALDKDLISVDRYLKFIYKLILQDN
NITESTPNPTIQSPTVSSVDTTTTTTTTNQSDTSNTTPTPTTTTTTATTTTTTQSTEDST
YEQLSNVDIYKYFGNDFIQSMVSQVLQVKEQRFNSIIIDSFLFKFRFLPFIQKQLIRYLL
ENHTRMNQREFIHFIQKLYNSVLSTYKKQQQQQQQQQTIEGNNNVNKKLLDDIVHSTRLL
IDKTSQRYNEKIALSLYEFYKLNQKQFLSPTLTNQQQQHQHLLQQHSQLSQPIDKMVSPT
LSSSELISAPSSTSSVSNNTGSNITSAPPSSTESPMETSSNNINNNSNNNNNNNSSSSSS
SNAPMDTTSDSNWD
NT seq 2565 nt   +upstreamnt  +downstreamnt
atggaagaatttttaattggtaatttaggatcagaaaaaattttaacatcactttcaaca
acaacatacccacttcaatttattagtcaatttcaacaagagaatggaatttcaaaaaag
agtttaccaacagtttcaccagttttaaatttattagatttacatcaaataccgcgtggt
gatttatatttaaatcttttaagttcattaaaaaaagatttattattaaaaattaataca
ttaaataaacatgaattagaaaaattattagaacaaacatttccatatattggatttgaa
gaattacaagaaataccaatgaatgtaatgaaaagattaacaccagaagtaccagttgca
tttttattgaaattagcagaagctgaagaattatatgaacaatgtccaattgaggtaaag
agacaaatttggattgttaatgaggagttatttaaagaaaagataaaaccattgattaat
caatatattgaggatcctatattcattcaagatatgaatgagcaattgttattgagttcg
tcgactacggtggacccattattcgcagtttcgcatttgcctgcaaagcgtcgtgaaaac
aattcagtcttacaggagatggtggagctgtttggcacaaagtcgcctgacctctaccaa
atgtttatcaatcagataaagcgatcgtttgccgatagtggtaattatttactttgtaat
ttgcgtgcagagatattgatggctatccacgataaatcaatccctgagatctacgacacc
gacgcgtcgcataatatagcctggtgtttggacgcctgcattagagacaacactcttgac
gcccgacgtatcaaagagattcaaactaatctatcttcgagtgtacatcatcaaaactct
tcaacattgggtgatacagctatggtatttgcaaatccaatcgctgtcaattgtatcgtt
agaaatattttaattcaattgaaagaagttgtaaaaagaaaacaaattccaaaagatgat
gaatctataaagtttttaacttatctattggttttagctcttaaatctcatgaaatgatt
aaagaatcaaaatttaaaattccacatgttaaaaaacatatccttcaaactttttatcca
cttttagcaactcaaattttagatgatataacacgtgaacaaacttcaacaatttcatta
tcatcatcttctacttctaatactagtagtacaaatcctgcaaatacaatctcttcaaat
ttaaatagttcatcatcaacagttataaaggatataagtagtggtggtggtagtagtgtt
aatagtggtggtaatagtggtaataatagtggtggtggtactggtaataatacaataggt
acaaatattaataaatcatcaaataatttattatcaatgtcatcttcaacttcaccagtt
ttagaatcaacttcattaatgagtgtatcagaatttcaagatttagaaaattgttattta
aaatatgaagtttgtaaaaaaataaccttatcttatattataaatagagcattggataaa
gatttaattagtgttgatagatatttaaaattcatttataaattaattttacaagataat
aatataactgaatcaactccaaatcctacaattcaatctccaactgtatcatcagttgat
acaacaacaacaacaacaacaacgaatcaatctgatacatctaatactacaccaacacca
acaacaacaacaacaacagcaacaaccactacaactacacaatcaacagaagatagtaca
tacgaacaattatcaaatgttgatatttataaatactttggaaatgattttatacagtca
atggtttctcaagttttacaagttaaagaacaaagatttaattcaatcattatagattca
tttttatttaaatttagatttttaccattcattcaaaaacaattaattagatatttgtta
gagaatcatacaagaatgaatcaaagagaatttattcattttattcaaaaattatataat
agtgtattatcaacttataaaaaacaacaacaacaacaacaacaacaacaaacaattgaa
ggaaataacaatgtaaataaaaaattattggatgatatagttcattctactagattatta
atcgataaaaccagtcaaagatataatgaaaagatagcattgtcactatacgaattttat
aaattaaatcaaaaacaattcctttcaccaactttaaccaatcagcaacaacaacatcaa
catttattacaacaacattcacaattatctcaaccaattgataaaatggtttcaccaaca
ttgtcttcttctgaattaattagtgcaccatcttcaacttcttcagtatcaaataatact
ggctcaaatattacaagcgcaccaccatcttcaactgaatctccaatggaaactagttca
aataatattaataataatagtaataataataacaacaacaatagtagtagtagtagtagt
agtaatgctccaatggacacaacatctgattcaaattgggattaa

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