Dictyostelium discoideum (cellular slime mold): DDB_G0284347
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Entry
DDB_G0284347 CDS
T00245
Symbol
vps4
Name
(RefSeq) AAA ATPase domain-containing protein
KO
K12196
vacuolar protein-sorting-associated protein 4
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Pathway
ddi03250
Viral life cycle - HIV-1
ddi03272
Virion - Hepatitis viruses
ddi04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
DDB_G0284347 (vps4)
03272 Virion - Hepatitis viruses
DDB_G0284347 (vps4)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
DDB_G0284347 (vps4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ddi04131
]
DDB_G0284347 (vps4)
03400 DNA repair and recombination proteins [BR:
ddi03400
]
DDB_G0284347 (vps4)
Membrane trafficking [BR:
ddi04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
DDB_G0284347 (vps4)
DNA repair and recombination proteins [BR:
ddi03400
]
Eukaryotic type
Check point factors
Other check point factors
DDB_G0284347 (vps4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Vps4_C
MIT
AAA_lid_3
RuvB_N
AAA_22
AAA_16
AAA_14
TIP49
AAA_5
DUF815
RNA_helicase
AAA_2
ATPase
NPHP3_N
AAA_24
nSTAND3
AAA_25
NACHT
AAA_17
Parvo_NS1
AAA_18
DUF5906
Viral_helicase1
Tma16
IstB_IS21
Bac_DnaA
Mg_chelatase
PhoH
AAA_33
bpMoxR
Torsin
PPV_E1_C
AAA_7
DUF630
AAA_28
KTI12
ABC_tran
Motif
Other DBs
NCBI-GeneID:
8624544
NCBI-ProteinID:
XP_638572
dictyBase:
DDB_G0284347
UniProt:
Q54PT2
LinkDB
All DBs
Position
4:1865073..1866634
Genome browser
AA seq
444 aa
AA seq
DB search
MGDVNFLQKAIQIVQQATEQDNAKNYAEAHRLYIQSLEWFTTALKYEKSERSKATIKAKT
LEYLQRAEQLKEYLDKSKNKKPVAVGGNKSNSAGSANGAGKSAKEDDEDMDPEDKKRNDS
LSSSIVTTKPNVKWDDVAGLYQAKEYLKEAVIFPIKFPQMFTGNRKPWKGILLYGPPGTG
KSYLAKAVATEISSTFFSISPSDIVTKWLGDSEKLVKQLFEMAREKNNSVIFIDEVDSLC
SSRNDQESESARRIKTEFLIQMNGVGNDSDGILVLAATNIPWGLDLAIRRRFEKRIYIGL
PEPQARAKMFQIHIGSTPNTLVQADYKKLADLTEGYSGSDIGSLVKDAIMQPVRAVQCAT
HFKQIRAPSREDPSVMTDYVTPCSPGDPLAQEMTWMDIDPTKLKEPEITIADCLKSLRVI
KPSVNKADLDRYVEFTNDFGQDGV
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgggtgatgttaatttcttacaaaaagcaattcaaattgttcaacaagcaacagaacaa
gataatgcaaaaaattatgcagaagcacatagattatatatccaaagtttagaatggttt
acaacagctttaaaatatgaaaaaagcgaaagatcaaaagcaacaattaaagcaaaaaca
ttagaatatcttcaaagagcagaacaattaaaagaatatttagataaatcaaagaataag
aaaccagtagcagttggtggtaataaaagtaatagtgctggtagtgcaaatggtgcaggt
aaatcagcaaaagaggatgatgaagatatggatccagaggataaaaaaagaaatgattct
ttatcctcttcaattgtaacaacaaaaccaaatgttaaatgggatgatgtagctggttta
tatcaagcaaaagaatacttaaaagaagctgttatctttccaattaaatttccacaaatg
tttacaggtaatagaaaaccatggaaaggtattttattatatggtccaccaggtacaggt
aaatcatatttagcaaaagcagttgcaacagaaatttcatcaacatttttttcaatttca
ccatcagatattgttaccaaatggttaggtgatagtgaaaaattggtgaaacaattgttt
gagatggcaagggaaaagaataatagtgtaatttttattgatgaagttgattctttatgt
tcatcacgtaatgatcaagaatctgaatcagcaagacgtataaagacagagtttctcatt
caaatgaatggtgttggtaatgattccgatggtatattggtattggcagcaacaaatatt
ccatggggtttggatttagcaattcgtagacgttttgaaaagagaatatatatcggttta
ccagaaccacaagcaagagccaaaatgtttcaaattcatattggttcaactccaaataca
ttagttcaagcagattataaaaagttggcagatttaaccgagggttactcgggttcagat
attggttcattggtaaaggatgcaattatgcaaccagttcgtgcagttcaatgtgcaact
catttcaaacaaattagagcaccctctagagaggatccttcagttatgaccgattatgtc
acaccttgttcacctggtgatccattggctcaagagatgacttggatggatattgaccca
actaaattaaaagaacctgaaattacaatcgccgattgtttaaagagtttaagagttatt
aaaccatctgttaataaagctgatttagatagatatgttgaattcactaatgattttggg
caagatggtgtataa
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