Dictyostelium discoideum (cellular slime mold): DDB_G0284577
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Entry
DDB_G0284577 CDS
T00245
Name
(RefSeq) NOT2/NOT3/NOT5 family protein
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Pathway
ddi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DDB_G0284577
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ddi03019
]
DDB_G0284577
Messenger RNA biogenesis [BR:
ddi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
DDB_G0284577
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
DDB_G0284577
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NOT2_3_5_C
Ribosomal_60s
Motif
Other DBs
NCBI-GeneID:
8624662
NCBI-ProteinID:
XP_638512
dictyBase:
DDB_G0284577
UniProt:
Q54PG2
LinkDB
All DBs
Position
4:complement(<2176004..>2178172)
Genome browser
AA seq
579 aa
AA seq
DB search
MSQYNKDDHDIDHEQQPHPGMMNYANYANPNMNYRPEMINPMINRQGPQHLNQQQNQNQQ
NQQQNFRGQNQNMMGGQNQNNNNNNSSNINNNRVGNNSNINGMPTGGNMATNINNMNMMN
NNNNTNNNNNGRPISSSNSQQPPPPPQQQQQPQQPLSRSTPNTPTTSSSPNLQNIPRMNG
NVNNAQQNTQQQQQRGNINSNGPIIQGMQNYPYNSNNNNNNNINNNNNNNNNNNNNISST
SPLQKQQGKDNNNNNNNNNNINNNNNNNNNNNFDLNNDFPVLSSTSNKNAQSKNNSNNNN
NNQNNNTNNNNNNNSNNNNNNNSNNNNSNNTFSSDENSLHHHLGYDQGHEEYQRKDFNIV
DKDNGKYGLLGLLSVIKNTDLDISTLSIGIDLTALGLNLNSQGEISNSFGSPWVDYSISR
KPEYYIPLCYSTPNLESPTFKMNLFTYETLFYIFYSMPKDVLQLHAAIELYDRDWRYHKE
GKIWLTRVQGTEPNITSTFEVGSFFFFDVTIWETVRRDNFYIPHDLLETKEVLIALVNKA
EQQQAAAAAAAAAVQQQQQQQQQQQQQNQQSSPTSPQNN
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagtataacaaagatgatcatgatattgatcatgagcagcaacctcatcctgga
atgatgaattatgcaaactatgcaaatccaaatatgaattatagaccagaaatgattaat
ccaatgataaataggcaaggaccacaacatttaaaccaacaacaaaatcaaaaccaacaa
aatcaacagcaaaattttagaggacaaaatcaaaatatgatgggtggacaaaatcaaaat
aataacaacaataatagtagtaatattaataataatagggttggaaataatagtaatatc
aatgggatgccaactggaggtaatatggcaaccaatataaataatatgaatatgatgaat
aataacaataataccaataataacaataatggaagaccaatatcatcttcgaattcacag
cagccaccaccaccaccacaacaacaacaacaacctcaacaaccattatcaagatcaaca
ccaaatacgccaacaacatccagctcaccaaatcttcaaaatataccaagaatgaatggt
aatgtaaataacgcacaacaaaacacacaacaacaacaacaaagaggaaatattaatagc
aatggaccaataatacaaggcatgcaaaattatccttataatagtaataacaataataat
aacaatattaataataataataataataataataataataataataatatttcttccaca
tcacctcttcaaaaacaacaaggaaaagataataataataataataataataataataat
atcaataataataacaataacaataataataataattttgatttaaacaacgatttcccc
gtactgagcagtacctcaaataaaaatgctcaatcaaaaaataatagtaataataataat
aataatcaaaataataacactaataataataataataataatagtaataataacaataat
aataatagtaataataataatagtaataatacattttcatcagatgaaaattcacttcac
catcatttaggttatgatcaaggtcacgaagaatatcaaagaaaagattttaatattgtt
gataaagataatggaaaatatggtttattaggtttattaagtgtaattaaaaatacagat
ttagatataagtaccctttccattggtattgatttaacagcgttaggtttaaatttaaat
tctcaaggggaaatatcaaattcatttggatcaccatgggtagattattcaatttcgaga
aaacctgaatattatatcccgttgtgttattctacaccaaatttagaatcaccaacattc
aagatgaacctattcacatatgaaacactattttatatattttattcaatgccaaaggat
gtattacaattacatgcagccatcgaattgtatgatagagattggagatatcacaaagaa
ggaaagatatggttaactcgtgttcaaggtactgaaccaaatataacctcaacctttgag
gttggttctttctttttctttgatgtcaccatttgggaaaccgttagaagagataacttt
tatattccacacgatctattggaaactaaagaagttttaattgctttagttaataaagct
gaacaacaacaagctgccgctgctgctgctgccgctgctgttcaacaacaacaacaacaa
caacaacaacagcaacaacaaaatcaacaatcatctccaacctcaccacaaaataattaa
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