Dictyostelium discoideum (cellular slime mold): DDB_G0284891
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Entry
DDB_G0284891 CDS
T00245
Symbol
rpb7
Name
(RefSeq) DNA-directed RNA polymerase II subunit 7
KO
K03015
DNA-directed RNA polymerase II subunit RPB7
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Pathway
ddi03020
RNA polymerase
ddi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DDB_G0284891 (rpb7)
09124 Replication and repair
03420 Nucleotide excision repair
DDB_G0284891 (rpb7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ddi03021
]
DDB_G0284891 (rpb7)
03019 Messenger RNA biogenesis [BR:
ddi03019
]
DDB_G0284891 (rpb7)
03400 DNA repair and recombination proteins [BR:
ddi03400
]
DDB_G0284891 (rpb7)
Transcription machinery [BR:
ddi03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
DDB_G0284891 (rpb7)
Messenger RNA biogenesis [BR:
ddi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
DDB_G0284891 (rpb7)
DNA repair and recombination proteins [BR:
ddi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
DDB_G0284891 (rpb7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHS2_Rpb7-N
S1
Motif
Other DBs
NCBI-GeneID:
8624825
NCBI-ProteinID:
XP_639913
dictyBase:
DDB_G0284891
UniProt:
Q54P04
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All DBs
Position
4:2602996..2604032
Genome browser
AA seq
172 aa
AA seq
DB search
MFFHLTLEKDLHMHPKHCGPNLFTIATQQLYSEVEGTCTGRYGFIITITSVDFLSKGKVL
ESSGYVVFNVKYKAIIFKPFKGEVLDAIVTKVTNLGFFAEAGPLSIFVSTQLIPSDMIFD
AQSAVPCFVSEDGSSKISKDDEVRLQIKGTRVDATEIFAIGSIREDYLGVIG
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgttttttcatttaacattagaaaaagatttacatatgcatccaaaacattgtggacca
aatttatttacaattgcaacacaacaactttatagtgaagtagaaggtacatgtacaggt
agatatggttttatcattacaattacatcggttgatttcttatctaaaggaaaggtatta
gaatcatcaggttatgtagttttcaatgttaaatataaagcaatcattttcaaaccgttt
aaaggtgaggttttagatgcaatcgttacaaaagtaacaaatcttggattttttgcagaa
gcaggtccactttcaatttttgtatcaactcaattgatcccatctgatatgatattcgat
gcacaaagtgctgtaccatgttttgtttctgaagatggttcatcaaaaatcagtaaagat
gatgaagttagattacaaattaaaggtactcgtgttgatgctaccgaaatttttgcaatt
ggttcaatcagagaagattatttaggtgtcattggttaa
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