Dictyostelium discoideum (cellular slime mold): DDB_G0284945
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Entry
DDB_G0284945 CDS
T00245
Symbol
fsjC
Name
(RefSeq) rRNA methyltransferase
KO
K14857
AdoMet-dependent rRNA methyltransferase SPB1 [EC:2.1.1.-]
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ddi03009
]
DDB_G0284945 (fsjC)
Ribosome biogenesis [BR:
ddi03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
DDB_G0284945 (fsjC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spb1_C
FtsJ
DUF3381
DUF3764
Motif
Other DBs
NCBI-GeneID:
8624859
NCBI-ProteinID:
XP_639947
dictyBase:
DDB_G0284945
UniProt:
Q54NX0
LinkDB
All DBs
Position
4:complement(2672551..2675180)
Genome browser
AA seq
833 aa
AA seq
DB search
MGQKKKKLAKGRLDKFYYMAKEQGYRSRAAFKLIQLNKKYNFLGTAKACLDLCAAPGGWM
QVASKYMPVQSLIVGVDLVPIRQVRNCIGLTEDITTQKCRTEIKKALKTWKVDVCLHDGA
PNMGTSWVQDAYQQAELTLHALKLATEFLTTGGWFVTKVFRGSDYNSLIWVFNKLFKKVE
STKPPSSRNASAEIFVVCQGFLNPKRIDPKLLDPKFVFKEIQEVKKVDVLSEKKKVNRAG
YEDGVTVLYKKGFISDFVNSNEHLQDLANFNAFEFDEAAKIFEQHELTTPEIKELVKDLK
VLNKNDFQKIIKWKKAMAAYKEKLDNPDEEETEKPEEKKELTAEEMEENLQEEMKEYLAL
VEKKKRKEKKRQNELKRKHQRKIELTMHIPGDKIEETTDGDLYSMKGKDEFDEDIVADHS
DISSDEFDSDDSDDDDDDDNNGDSKLIDDDEYLEQQLDEQYKLYQQRIRKKAAKLDDVKV
KKDKIGQDGYNEDDEEFVEEQEESNPLLVGNKRKEPDAQAVSSLFFDNELFGGVEYRNPG
DSESEPEQDGDDDQDDENNKPIDISKLKKQKPQAAQPITKKQKTTNSAEFGKQKSKYQKN
PTLDDKDDQDDDDDKGNSIKGFEEVPVQEEVEYESDSDEDIDDKIKTKALGEFLIRKKSR
QDLIDDSFNKYAFNDTGLPNWFTDDENRHNKAQTPLTKEMVDEIRRKIKEIDDRPIKKIA
EAKARKKYRLGKKMEKTRDKASSIVDNPEMSNREKSKAIEKLYSGTDKKNMKPKKIIMIA
KKSKTAGGGTGKYKIVDKRMKKDLRAQKNKLKTVGRSKDSSKKSKPSGGKNKK
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atgggtcaaaagaaaaagaagttagccaagggtcgtttagataagttttactatatggcc
aaagagcaaggttatagatctcgtgctgctttcaaattaattcaattaaataaaaaatac
aattttttgggtaccgcaaaagcttgtttagatctttgtgctgcaccaggtggttggatg
caagttgcatcaaaatatatgccagttcaatcattaattgttggtgtagatttagtacca
attagacaagttagaaattgtattggtttaacagaagatattacaacacaaaagtgtaga
acagagattaaaaaagcattgaaaacatggaaagttgatgtatgtttacatgatggtgca
ccaaatatgggtacatcatgggtacaagatgcatatcaacaagcggaattaactttacat
gcattaaagttggcaactgaattccttactactggtggttggtttgtaactaaagttttc
agaggctcagattataattcattgatttgggtattcaacaaactctttaaaaaagttgaa
tctactaaaccaccatcatcacgtaatgcatcagcagagattttcgtagtttgtcaaggc
tttttgaatccaaagagaatcgatccaaaattattagatccaaaattcgttttcaaggag
attcaagaagttaagaaagtcgatgttctttcagagaagaaaaaagtcaatagagctggt
tacgaagatggcgtcacagtattgtataaaaaaggtttcatttcagattttgtcaatagt
aatgaacatcttcaagatcttgcaaatttcaatgcctttgaatttgatgaagccgcaaaa
atctttgaacaacatgaattgaccacaccagagattaaagagttggttaaagatttgaaa
gttttaaataaaaatgatttccaaaaaatcattaaatggaagaaagctatggctgcctat
aaagagaaattggataatccagatgaggaagagaccgagaaaccagaggaaaagaaagaa
ttaaccgccgaagaaatggaagagaatttgcaagaggagatgaaggagtacttggctttg
gttgaaaagaaaaagagaaaagaaaagaagagacaaaatgaattaaaacgtaaacatcaa
agaaagattgaattaacaatgcatattccaggtgataaaattgaagaaactaccgatggt
gatttatattcaatgaagggtaaagatgaatttgatgaagatattgtagctgatcatagt
gatatcagttctgatgaatttgattcagatgattctgacgatgatgacgacgatgacaac
aatggtgattcaaaattaattgatgatgatgaatatcttgaacaacaattagatgaacaa
tataaattatatcaacaaagaattagaaagaaagcagcaaaattagatgatgttaaagtt
aaaaaagataaaatcggtcaagatggttataatgaagatgatgaagaatttgttgaagaa
caagaagaatcaaatccattattagttggtaataaacgtaaagaaccagatgctcaagct
gttagttcattattttttgataatgaattatttggtggtgttgaatatagaaatccaggt
gattctgaatccgaaccagaacaagatggcgacgacgaccaagatgatgaaaataataaa
ccaattgatattagtaaattaaagaaacaaaaaccacaagctgctcaaccaattacaaag
aaacaaaaaactacaaacagtgctgaatttggtaaacaaaagagtaaatatcaaaagaat
ccaacattggatgataaagatgatcaagatgatgatgatgataaaggaaatagcattaaa
ggtttcgaagaagtaccagttcaagaagaggttgaatatgaatcagactcggatgaagat
attgatgataaaattaaaactaaagcattgggtgaattcttgattagaaagaaatcaaga
caagatttaatcgatgattcatttaataaatatgcattcaatgatacaggtttaccaaat
tggttcactgatgatgaaaatcgtcataataaagctcaaactccactcaccaaagaaatg
gtcgatgaaattagaagaaagattaaagaaattgatgatcgtccaatcaagaagatcgca
gaggctaaggctagaaagaagtatcgtcttggtaagaaaatggagaaaactcgtgacaag
gcaagtagtatcgttgataatccagaaatgtccaatcgtgagaaatctaaagccattgaa
aaactttactctggtactgataagaagaatatgaaaccaaagaagatcatcatgattgct
aaaaaatcaaaaactgctggtggtggtactggtaaatacaagatcgttgataaacgtatg
aagaaagatttaagagctcaaaagaataaattaaaaactgttggacgttcaaaagattct
tctaaaaagtcaaaaccaagtggtggtaaaaataagaaataa
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