Dictyostelium discoideum (cellular slime mold): DDB_G0284987
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Entry
DDB_G0284987 CDS
T00245
Symbol
repG
Name
(RefSeq) flap structure specific endonuclease 1
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Pathway
ddi03030
DNA replication
ddi03410
Base excision repair
ddi03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DDB_G0284987 (repG)
03410 Base excision repair
DDB_G0284987 (repG)
03450 Non-homologous end-joining
DDB_G0284987 (repG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ddi03032
]
DDB_G0284987 (repG)
03400 DNA repair and recombination proteins [BR:
ddi03400
]
DDB_G0284987 (repG)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ddi04147
]
DDB_G0284987 (repG)
DNA replication proteins [BR:
ddi03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
DDB_G0284987 (repG)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
DDB_G0284987 (repG)
DNA repair and recombination proteins [BR:
ddi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DDB_G0284987 (repG)
Exosome [BR:
ddi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
DDB_G0284987 (repG)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XPG_N
XPG_I
5_3_exonuc
5_3_exonuc_N
tRNA_bind_2
HHH_5
DUF4142
Motif
Other DBs
NCBI-GeneID:
8624889
NCBI-ProteinID:
XP_639977
dictyBase:
DDB_G0284987
UniProt:
Q54NU0
LinkDB
All DBs
Position
4:complement(<2762877..>2764154)
Genome browser
AA seq
384 aa
AA seq
DB search
MGIKKLTDLIEDNAPTSIKTNILKNYFGRIIAIDASTSLYQFLIAMNADVSSALTNQLGE
TTSHLQGMFYRTIKLISRGIKPIYVFDGSAPVLKSGELAKRQARRKEAKENLKEATEVGT
NEEVQKFAKRVITVTRKQNEDCIKLLTLMGVPIVKAPCEAEAQCAEIVKKGKAWATGSED
MDSLTLGSTVLLRRLFFSEAKKMPILEFELQSVLEGLGLTQDEFIDLSILLGCDYCDSIK
GIGPKRAIELIQKHKSLEEVIKHLDKSKYPLPEFFPYPEVRELFKNPNVIPADQLPPFQW
KDPDVEGLNKFLVEEMGFSDVRVAQGIEKLKKFKNTSVQSRMDSFITVIKKPEDPNDKKK
KVTKTPSKPSAKTSKKSSSTFKRK
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgggaattaaaaaattaacagatttaattgaagataatgcaccaacttcaattaaaaca
aatatattaaaaaactattttggtagaattattgcaattgatgcatcaacaagtttatat
caatttcttattgcaatgaatgctgatgtttcttcggcattaacaaatcaacttggtgaa
actacaagtcatttacaaggtatgttttatcgtacaattaaattaatttcaagaggtatt
aaaccaatttatgtatttgatggtagtgcaccagtattaaagagtggtgaattagcaaaa
agacaagcaagaagaaaagaagcaaaagagaatttaaaggaagcaacagaggttggtacc
aatgaagaggttcagaaatttgcaaaacgtgttattacagttacacgtaaacaaaatgaa
gattgtataaaacttttaacattaatgggtgtaccaattgtaaaggcaccatgtgaggca
gaagcgcaatgtgcagagattgtaaagaagggtaaagcatgggcaaccgggtcagaggat
atggattctttgacattaggttcaacagtactacttagacgtcttttcttttcagaagca
aagaaaatgccaattctagaatttgaattacaatcagtattggagggtttagggttaact
caagatgagtttattgatctttccattcttttaggttgtgattattgtgatagtatcaaa
ggtattggtccaaagagagcaattgagttaattcaaaaacataaatcattggaggaggta
atcaaacatttagataaatccaaatacccattaccagagtttttcccatacccagaggtg
agagaattatttaaaaatccaaatgttattccagctgatcaattaccaccttttcaatgg
aaagatccagatgttgaaggtttaaataaatttttagttgaagaaatgggtttctctgat
gttagagtcgctcaaggtattgaaaaattaaagaaatttaaaaatacaagtgttcaatct
cgtatggactcttttataactgtaattaaaaaaccagaagatccaaatgataaaaaaaag
aaagttacaaaaactccttcaaaaccttctgcaaaaacttctaaaaaatcttcatcaact
tttaaaagaaaataa
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