Dictyostelium discoideum (cellular slime mold): DDB_G0285077
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Entry
DDB_G0285077 CDS
T00245
Symbol
u2af1
Name
(RefSeq) CCHC-type zinc finger-containing protein
KO
K12836
splicing factor U2AF 35 kDa subunit
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Pathway
ddi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
DDB_G0285077 (u2af1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ddi03041
]
DDB_G0285077 (u2af1)
Spliceosome [BR:
ddi03041
]
Complex A
U2 snRNP components
U2 related factors
DDB_G0285077 (u2af1)
Complex B
DDB_G0285077 (u2af1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
RRM_1
TFIIA
Motif
Other DBs
NCBI-GeneID:
8624909
NCBI-ProteinID:
XP_639991
dictyBase:
DDB_G0285077
UniProt:
Q54NS6
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All DBs
Position
4:2799520..2801698
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AA seq
471 aa
AA seq
DB search
MAERRAAIFGTEKDQQNCPFYLKIGACRHGDRCSRLHNKPVLSQTILLPNLYQSPISKKA
IEAAGGQAPNLSDAELQQHFDEFYEDIYEGLAKYGQVDLLNVCANLGDHLVGNVYVKYQK
EDDANESIKGLKGRFYDGRPIISEFSPVTDFTEARCRQYDIGTCNRGGFCNFMHLHNPSK
SLYYKLFGDRKSRSPSPKRDYRDRDRDYGRRGYDRDYRDRDRDRDRDYGRRGGGGYDRDY
RDRDRDYGGGGGRYDRDYRDRDRDRDGYGRSRDYDRDRDRRPYDEFRGSRGSKSPEYSRN
SGGDIPPSDHHFSRSLLLTDYAYPPPTGGIVNGSPSSNQPPLHLPPPTNEYSHILPITTT
QSPLSTGSNGGSLQQQQQQQQQQQQQPQQQQQQQTPQIIPQPSENGGNVSTIGEKRVRDD
ETITSEKRLKGEENSQSDENGSIQWASNDERRTDEYDVKTSLKTSISESKE
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaagaagagccgctattttcggaactgaaaaggatcaacaaaattgtccattt
tatttaaaaattggagcatgtagacatggtgatcgatgttcaagattacataataaacca
gtattaagccaaactatattattaccaaatttatatcaaagtccaatctcaaaaaaagca
attgaagcagcaggaggtcaagcaccaaacctttcagatgcagaattacaacaacatttt
gatgaattttatgaagatatttatgaaggtcttgcaaagtatggccaagtagatctttta
aatgtatgtgcaaatttaggtgatcatttagttggtaatgtttatgttaaatatcaaaaa
gaagatgatgcaaatgaatcaattaagggtttaaagggtagattttatgatggtagacca
attatttctgaattttcaccagtaacagattttacagaagcaagatgcaggcagtacgat
ataggaacatgcaatcgtggtggattttgtaattttatgcatttacataatccatcaaag
tcattgtactataaattatttggcgatagaaagagtagaagcccaagtccaaagagagat
tacagagatagagatagggattatggtagaagaggttacgatagagactatagagacaga
gacagagatagagacagagactatggaagaagaggtggtggtggctatgatagagactac
agagatagagatagagattatggtggtggcggcggtagatatgacagagactacagagat
agagacagagatagagatggctatggtagatcacgtgattatgatcgtgaccgagaccgt
cgtccatatgacgagtttagaggaagtagaggctcaaaatcaccagaatactcaagaaat
agtgggggtgacattccaccctctgatcatcactttagtagatctctacttttaacagac
tatgcctatcctccaccaaccggaggtattgtaaatggtagtccatcctcaaatcaacca
cctcttcaccttcctccaccaaccaatgaatattcacacattttaccaattacaactaca
caatcaccactctctactggctcaaatggtggctcactacaacaacaacaacaacaacaa
caacaacaacagcaacaaccacaacaacaacagcaacaacaaacaccacaaataatacca
caaccatcagaaaatggtggaaatgtatcaacaattggtgaaaagagagttagagatgat
gaaacaataacttccgagaaaagattaaaaggtgaggaaaattctcaaagtgatgaaaat
ggttccattcaatgggcgtcaaatgatgaaagaagaactgatgaatacgatgttaaaacc
tctttaaaaacttcaatctctgaatcaaaagagtaa
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