Dictyostelium discoideum (cellular slime mold): DDB_G0285117
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Entry
DDB_G0285117 CDS
T00245
Symbol
rad54b
Name
(RefSeq) CHR group protein
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Pathway
ddi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DDB_G0285117 (rad54b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ddi03400
]
DDB_G0285117 (rad54b)
DNA repair and recombination proteins [BR:
ddi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
DDB_G0285117 (rad54b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
DEAD
ZGRF1-like_N
AAA_22
Motif
Other DBs
NCBI-GeneID:
8624946
NCBI-ProteinID:
XP_639875
dictyBase:
DDB_G0285117
UniProt:
Q54NP1
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Position
4:complement(2873116..2876085)
Genome browser
AA seq
989 aa
AA seq
DB search
MKKSSKGFVSPYKDSNTTSTPSINHLASKPKKITTSTTSTTSTTTTSSSSSPIETQKTKS
KANSSSNNNDKSEDKTNDGELIHYKIGWCAKSTKKHKIYNDGYLMYDQDKKIFTLYDDCG
KENGKSVTVNIQDVKPDTKVFISSKEVLIEHIITSKEFEKATGLESSLVSNSTSSSSLST
TTIRKLSKKQQKLQEEEEEKQQQQQDEKQTTNINKSTIKKEFKSHTSLEEQKSSKKIVCP
HDPNSKDALIFYSPPPSQLDEEGNKVVHVVLDPYIGRHLRPHQRRGVKFLYDCVTGNSND
NGYSGAILADQMGLGKTLQTLALLWTLLKQSPYGKPTIKKAIIVTPSTLVNNWKSEIQKW
FGNGRLIASTLTDSLTKETKANLNDFNTSIKPVLIISYEQCRIFSKELETMSCGLMVCDE
AHRLKNSNAKTTQSIMSVRCDRKILLTGTPIQNNLVEFYSMMDFANPNCLGSLADFKKSF
IIPINKSRESPNSTSTSEGIRKSIQLSKLVKPFIIRRKSNILEKYLPPKRVQIIFCKLSS
LQIELYKSILNSNSVKSLLSGGGSRGSATSLSTITLLKKLCNSPSLLLLNNKQDEGGEQQ
QTEIQNILKKHNYTLENYQEIQEQQDNESGKLLFVESLIKQLKPMNEKLVLVSNFTKTLD
VFERLCKRLSIDTLRLDGDVKADSRQALVDKFNSSTQNVSSSKSSSSQYQVFLLSAKAGG
VGINLIGGNHLVLYDPDWNPAIDIQAMERIWREGQTKPVFIYRLFSTGTIEEKIYQRQLM
KESISNSIVDKKFNDNGGNFSLEDLKDIFSYNENTNSDTHDLLQCNCGNSNSNASTSINI
KRIEIFKTIQHLDKWEHYRDVDQFSKQCNHDSILKKLKSKQDPISFIFISKTPIPSNNDL
DDDQNDDDDFSFLEVENQIEDEEEDNNQQNTTPSKKRSNKKKEVDEEEEQEEEGEEEEET
NPQTNLRKRAKINIVEDNDDDDLSDLDMS
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaagtagcaaaggatttgtttcaccttacaaagattcaaacacaacatcaact
cctagcattaatcatttagcatcaaaaccaaaaaaaataacaacatcaacgacatcaaca
acttcaacaacaacaacatcatcatcatcatctcctatagaaacacaaaaaacaaaatcg
aaagcaaatagtagtagcaataataatgataaaagtgaagataaaactaatgatggagaa
ttaattcattataaaattggttggtgcgcaaaatcaactaaaaaacataagatttataat
gatggttatttaatgtatgaccaagataaaaaaatatttacattatatgatgattgtggt
aaagagaatggaaagagtgtaacagtgaatatacaagatgttaaaccagatacaaaagta
ttcatctcttcaaaagaagtattaattgaacatataattacaagcaaagaatttgaaaaa
gcaactggtttagagtcatctttagtttcaaattctacatcatcatcatcactatcaaca
acaacaattagaaaactaagtaaaaaacaacaaaaacttcaagaagaagaggaggaaaaa
caacaacaacaacaagatgaaaaacaaacaacaaatattaataaatcaacaattaaaaaa
gaatttaaaagtcatactagtttagaagaacaaaaaagttcaaaaaagattgtttgtcca
catgatccaaattcaaaggatgcattaatattttattcaccaccaccaagtcaattggat
gaagaaggtaataaagttgttcatgttgtattggatccatatattggtagacatttaaga
cctcatcaaagaagaggtgttaaattcctttatgattgtgttacgggtaattcaaatgat
aatggatacagtggtgctattttagctgatcaaatggggttaggtaaaacattacaaact
ttagctttactttggacattattgaaacagtcaccatacggcaaaccaacaataaaaaag
gctatcatagttacaccatcgacattggttaacaattggaagagtgaaattcaaaaatgg
tttggcaatggtcgtttgattgcatcaactttaacagattcattaacaaaagagacaaaa
gcaaatttaaatgatttcaatacatcgattaaacccgtattaattatctcttatgaacaa
tgtagaatcttttcaaaggaattggaaacgatgagttgtggtttaatggtttgtgatgaa
gctcatcgtttaaagaattcaaatgcaaagaccactcaatcgataatgagtgttagatgt
gatagaaagattttattaacaggtacaccaattcaaaataatttagtggaattttattca
atgatggattttgctaatccaaattgtttaggttctttagctgactttaaaaaatcattc
atcataccaattaataaatctagagaatcaccaaattcaacttcaacttcagaaggtatt
agaaaatcaattcaactctcaaaattggttaaaccattcatcattagaagaaaatcaaat
attttggagaaatatttaccaccaaaaagagtacaaatcatattttgtaaattatcatca
cttcaaattgaattatataaatcaattttgaattcaaatagtgttaaatcattattatca
ggtggtggtagtagaggttcagcaacttctctttcaacaataacattattaaagaaatta
tgtaattcaccatcattattattattaaataacaaacaagatgaaggaggagaacaacaa
caaactgaaattcaaaatatattaaagaaacataattatacattagaaaattatcaagag
attcaagaacaacaagataatgaatctggtaaattattatttgttgaatcattgattaaa
caattaaaaccaatgaatgaaaaattggtattggtttcaaatttcacaaaaacattggac
gtctttgagagattatgtaaacgattatcaattgatacacttagattggatggtgatgtt
aaagctgattcaagacaagcattggttgataaatttaattctagtactcaaaatgtttca
tcatcaaaatcatcgtcatcacaatatcaagtgtttttgttatctgcaaaagctggtggt
gttggtattaatttaattggtggtaatcatttggttctatatgatccagattggaatcct
gcaatcgatattcaagcaatggaaagaatttggagagaaggtcaaactaaaccagttttc
atctatagattattttcaacaggtacaattgaagagaagatttatcaaagacaattaatg
aaagaatcaatttcaaattcaattgttgataaaaagtttaatgataatggtggtaatttc
tcattggaagatttaaaagatatcttttcttataatgaaaatacaaattcagatactcat
gatttattacaatgtaattgtggtaatagtaatagtaatgctagtactagtataaatatt
aaaagaatagaaatatttaaaactattcaacatttagataaatgggaacactatagagat
gtagatcaattttcaaaacaatgtaatcatgattcaatattaaagaaattgaaatcaaaa
caagatccaatttcttttattttcatttctaaaacaccaataccatcaaataatgattta
gatgatgatcaaaatgatgatgatgatttttctttcttagaagtagagaaccaaattgaa
gacgaagaagaggataataaccaacaaaataccacaccatcaaagaaaagatcaaataaa
aagaaagaagttgatgaggaggaggagcaggaggaagaaggagaagaagaagaagagaca
aatcctcaaaccaatttaagaaagagagcaaaaataaatattgttgaagataatgacgat
gatgatttgtcagatttagacatgtcataa
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