Dictyostelium discoideum (cellular slime mold): DDB_G0285381
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Entry
DDB_G0285381 CDS
T00245
Symbol
polD1
Name
(RefSeq) DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Pathway
ddi03030
DNA replication
ddi03410
Base excision repair
ddi03420
Nucleotide excision repair
ddi03430
Mismatch repair
ddi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DDB_G0285381 (polD1)
03410 Base excision repair
DDB_G0285381 (polD1)
03420 Nucleotide excision repair
DDB_G0285381 (polD1)
03430 Mismatch repair
DDB_G0285381 (polD1)
03440 Homologous recombination
DDB_G0285381 (polD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ddi03032
]
DDB_G0285381 (polD1)
03400 DNA repair and recombination proteins [BR:
ddi03400
]
DDB_G0285381 (polD1)
Enzymes [BR:
ddi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DDB_G0285381 (polD1)
DNA replication proteins [BR:
ddi03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
DDB_G0285381 (polD1)
DNA repair and recombination proteins [BR:
ddi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
DDB_G0285381 (polD1)
MMR (mismatch excision repair)
DNA polymerase delta complex
DDB_G0285381 (polD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
RNase_H_2
DNA_pol_B_2
REV3_N
Motif
Other DBs
NCBI-GeneID:
8625091
NCBI-ProteinID:
XP_638283
dictyBase:
DDB_G0285381
UniProt:
Q54N97
LinkDB
All DBs
Position
4:complement(3206066..3209653)
Genome browser
AA seq
1104 aa
AA seq
DB search
MKRSIVTGGGNNDKKFKAQPPPKNNYRGGGDDEEDDEFEEDDDEDEGDEFGEEEDEDDID
VENIIASDSMDIDIQDDGSQQLFLWSRKPVQDLVPHKKPLIFQQLEVDYTEIKEPVPGMP
GPKVGPLPAIRLFGVTKEGNSVLCKVHGFLPYFFISCPPGFTEADCKSLKHDLNESMKMS
SNQSNEKDIENIVVSIDIEKKKSIMGYNPNPLSDFIRITLILPKFVTRCREIFESGRHHF
TIPGQPFRQYQTYESNILFALRFLIDKGITGCSWIELPANTYKLSETPVSTCQIEVDTSL
ETIISLSDDDSPAPYRILSFDIECAGRKGVFPEPEKDPVIQISNIVKNNGDAEPFIKNIF
TLKGCSSIVGAHVIPHKREEDLLREWRKFVIKVDPDVIIGYNIVNFDIPYLISRARQLKI
PEFALLGRIKTTISKIKSTRFSSSNLGTRESKEISMPGRTQFDLMQAIQRDHKLTSYSLN
NVSAHFLKEQKEDVHFSIISDLQNGTDDDRRRLAVYCIKDAVLPMRLLDKLMILINYTEM
ARVTGVPLSYLLGRGEGIKVLSQLYRKAMVENFLIPTYKVTGKGEKFQGAIVIEPTPGFY
DTPIATLDFTSLYPSIMMAHNLCYSTLLSAEEAKKLPPEIYTTTPFGDHFIKSDTKKGLL
PRILEELLSARKKAKDELKNEKDPFKRAVLDGRQLALKISANSVYGFTGARVGKLPCLEI
SRSVTSFGREMLDKTKKIVEERYTIANGYKHDAVIIYGDTDSVMVKFGVKTVAEAMEMGR
DAAKFVTTTFIRPINLDFEKVYYPYLLMAKKKYAGLYWTKPDIHDRMDVKGLEMVRRDTC
LLVRNVVSTILKKILIEKDLKSAEEYTKSVISDLLQNRLDLSMLVITKALSKTQYKGKVI
HNELARKMRARDPATAPNLGDRVPYVVIQGSKGAPIYEKAEDPLYALEHNILLDCQYYLD
KQLKAPLIRIFKPIMSNPDLIFHGEHTRTIAQSTLSDNNKGFFGTLKKKKVCMNCPKELT
DTESTTCINCQHKEASLYQTSLEKVTSLETKFSEAWTQCQRCSGSLHQPVLCSNRDCPIF
YMRTKVQLDLIEAKKTLNRFNVEW
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagatcaatagtaacaggtggtggaaataatgataaaaaattcaaagcacaacca
ccaccaaagaataattatagaggtggtggtgacgatgaagaggatgatgaatttgaagag
gacgatgacgaagatgaaggagatgaatttggagaggaagaagatgaagatgatatcgat
gttgaaaatataatagcaagtgattcaatggatattgatattcaagatgatggatcacaa
caattatttttatggtcaagaaaacctgttcaagatttagtaccccacaagaaaccatta
atctttcaacaattagaagtagattatacagagattaaagaaccagtaccaggtatgcca
ggtccaaaagttggaccattaccagcaattcgtttatttggtgtcacaaaagaaggtaat
agtgttttatgtaaagttcatggtttcttaccttactttttcattagttgtcctccaggt
ttcactgaagcagattgtaaatctttaaaacatgatttaaatgaatcaatgaaaatgtca
tcaaatcaaagcaatgaaaaagatattgaaaatattgttgtttcaattgatatagagaaa
aagaaatcaattatgggttataacccaaatcctttatctgatttcattagaattacttta
attttaccaaagtttgttacaagatgtagagaaatttttgaaagtggtagacatcacttt
acaattccaggtcaaccatttagacaatatcaaacctatgaatctaatattctatttgca
cttcgtttcttaattgataagggaattacaggttgtagttggatagaattaccagcaaat
acatataaattatcagaaacacctgtttcaacatgtcaaattgaagttgatacatcatta
gaaacaattatatcacttagtgatgatgattcaccagcaccatatagaattttatcattt
gatattgaatgcgcaggtagaaaaggtgtatttccagaaccagaaaaggatccagttatt
caaatttcaaatattgtaaaaaataatggtgatgcagaaccatttataaagaatattttc
acattgaaaggttgttcaagtattgtgggagcacatgtaattcctcataaaagagaggaa
gatttgttaagagaatggagaaagtttgtaattaaagtggatccagatgttatcattggt
tataatattgtaaatttcgatattccctatttaattagtagagcaagacaattgaagata
ccagagtttgcacttttaggtagaattaaaaccaccatatcaaagattaagagcactcgt
ttctcaagtagtaatttaggtacaagagagagtaaagaaatttcaatgccaggtagaact
caattcgatctaatgcaagcgattcaaagagatcacaaactaacaagttattcactcaat
aatgtatcggctcattttttaaaggagcaaaaggaggatgttcatttttcaattatctct
gatcttcaaaatggtacagatgatgatcgtagaagattggcagtctattgcataaaagat
gccgtattaccaatgagattattggataaattgatgattcttatcaattacacagagatg
gctcgtgtaactggtgttccattaagttatttgttgggtcgtggtgaaggtatcaaagtg
ctatcccaactttatcgtaaggccatggtagagaatttcctcattccaacttataaagtc
actggtaaaggtgaaaagtttcaaggtgccatcgttattgagccaacaccaggtttctat
gatactccaattgcaacactcgatttcacttcactttatccatcaattatgatggctcat
aatctttgttattccactttgttatcagcagaggaggcaaagaaattaccaccggaaatc
tatacaaccactccatttggtgatcattttataaaatcagatacaaagaaaggtttactt
ccaagaattctcgaggagttattgtctgcaagaaagaaagcaaaagatgaattaaagaat
gaaaaagatccattcaagagagcagtgttggatggtagacaattggcattgaaaatttca
gcaaattcagtttatggtttcactggtgctcgtgttggtaagctaccatgtcttgagatt
tctcgttccgtaacttcatttggtagagaaatgcttgataagacaaagaagatcgtagag
gaacgttatactatcgccaatggttataaacatgatgccgtaattatctatggtgataca
gattcggtaatggttaaatttggtgtaaagaccgtcgcagaggcaatggaaatgggtaga
gatgctgccaagtttgtaactaccacttttattcgtccaattaatttagattttgaaaag
gtttattatccttatcttttaatggccaagaaaaagtatgccggtttgtattggacaaaa
ccagatattcacgatagaatggatgtcaaaggtttggaaatggttcgtagagatacttgt
ctattggttagaaatgtcgttagtactatccttaaaaagattctcattgaaaaggattta
aaatctgccgaagaatatacaaagagtgtcattagtgatctcttacagaatcgtttagat
ctttcaatgttggtaattacaaaagctctctcaaaaactcaatacaaaggaaaggtaatc
cataatgaattggctagaaaaatgagagctagagatccggcaacagctccaaatttaggt
gatcgtgtgccttatgtggtcattcaaggctcaaagggtgcaccaatctatgagaaagct
gaagatccactttatgctttggaacataatatccttttggattgtcaatactatttggat
aaacaattgaaagcaccattgattcgtattttcaaaccaattatgtcaaatcctgattta
attttccatggtgaacatactagaaccattgctcaatcaacactcagtgataataacaaa
ggtttctttggtactttgaaaaagaaaaaagtctgtatgaattgtccaaaggaattaact
gatacagaatctacaacttgtataaattgtcaacataaagaagcctctctctatcaaacc
tctttggaaaaagttacaagtttagaaactaaattctctgaagcttggactcaatgtcaa
cgttgttctggtagtttacatcaacctgtactttgttcaaatcgtgattgtccaatcttt
tatatgagaactaaagttcaattagatcttattgaagcaaagaaaactttaaatagattt
aatgttgaatggtaa
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