Dictyostelium discoideum (cellular slime mold): DDB_G0285395
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Entry
DDB_G0285395 CDS
T00245
Symbol
snrpD2
Name
(RefSeq) LSM domain-containing protein
KO
K11096
small nuclear ribonucleoprotein D2
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Pathway
ddi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
DDB_G0285395 (snrpD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ddi03041
]
DDB_G0285395 (snrpD2)
03032 DNA replication proteins [BR:
ddi03032
]
DDB_G0285395 (snrpD2)
Spliceosome [BR:
ddi03041
]
Complex A
U1 snRNP components
Sm proteins
DDB_G0285395 (snrpD2)
U2 snRNP components
DDB_G0285395 (snrpD2)
Complex B
U1 snRNP components
DDB_G0285395 (snrpD2)
U4/U6.U5 tri-snRNP components
DDB_G0285395 (snrpD2)
Complex C
U2 snRNP components
DDB_G0285395 (snrpD2)
DNA replication proteins [BR:
ddi03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
DDB_G0285395 (snrpD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Rad21_Rec8_N
Motif
Other DBs
NCBI-GeneID:
8625063
NCBI-ProteinID:
XP_638255
dictyBase:
DDB_G0285395
UniProt:
Q54NC5
LinkDB
All DBs
Position
4:complement(3142648..3143310)
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AA seq
112 aa
AA seq
DB search
MSRMNDETMEDKPDDSNGPLSILMDSVNNNTQVLINVRNNKKLLGRVRAFDRHCNMVLEN
VKEIWTEVPKTAKGKKKAKPINKDRFISKMFLRGDSVILVLKNPLGAPPQAN
NT seq
339 nt
NT seq
+upstream
nt +downstream
nt
atgagcagaatgaatgatgaaacaatggaggataaacccgatgattcaaatggtccactc
tcaattttaatggatagtgtaaataataatactcaagttcttataaatgttagaaataat
aaaaaacttttaggtagagttagagcatttgatcgtcattgtaatatggttttagaaaat
gtaaaagaaatttggacagaagtaccaaaaacagcaaaaggtaaaaagaaagcaaaacca
attaacaaagatcgtttcatcagtaaaatgtttttaagaggagattcagtaattttagtt
ttaaagaaccctttaggtgcaccaccacaagcaaattaa
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