Dictyostelium discoideum (cellular slime mold): DDB_G0285415
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Entry
DDB_G0285415 CDS
T00245
Symbol
nup85
Name
(RefSeq) nucleoporin 85
KO
K14304
nuclear pore complex protein Nup85
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Pathway
ddi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
DDB_G0285415 (nup85)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ddi03019
]
DDB_G0285415 (nup85)
03036 Chromosome and associated proteins [BR:
ddi03036
]
DDB_G0285415 (nup85)
Messenger RNA biogenesis [BR:
ddi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
DDB_G0285415 (nup85)
Chromosome and associated proteins [BR:
ddi03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
DDB_G0285415 (nup85)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Nucleoporin_FG
DUF1563
Motif
Other DBs
NCBI-GeneID:
8625088
NCBI-ProteinID:
XP_638280
dictyBase:
DDB_G0285415
UniProt:
Q54NA0
Structure
PDB
PDBj
LinkDB
All DBs
Position
4:3200903..3204038
Genome browser
AA seq
890 aa
AA seq
DB search
MFSLNPQSNGNSNNLFGNVTLGNFSNNSNNLFGGSSTTSTNTNNSNNLFGGSSTTNSNNL
FGSGGSSTTNNNNFNSNFNNNNIKNENKIKNGKKFYNFRWSPTGEILLYNTLNNFDNHNF
DQKNGGSDTIRYEMNTTLSTIKKFYNDLYTNFETMQRIAGLSNQVIPDDRVREISHHSRT
YLSVILAAINQMSKSQKTGSYIDDEDSCMNCDPLDNDLIKIQTPRVLEYFKQYPNKTLIF
FCGSIDSIYPYLCSKLSMETKSKCILIARESNVPNSKRLDLIRTISNQGELKILNKDEYS
NRYQIANENYGELDDVLTLEIDDTYLAYEREIDNLICMSTMWRVANLFYFSVSSSSNSVS
PTQLLDCIELERKELLNSIEQQGTQDPMDSEYYNQIARLLVCGCIDQVIQQLNILSRAPR
SASQIKSTSRKSPINLLIDILSSIPLKKKSINGGGGAPLYPNEHLIQWNKWHQETQKILS
QYIESGSSSTNQVDENLLPIVKILLGDQQTIMSTCNSFLQLVVSNILFVEYTTSTTQLRQ
LFTQCYQTIQAPTTVDKIFLSFATKDLDITLKKIFKHSPAWLAVHLSDLLYHHPYVMRKL
PNSESQLTNIREYLLSDFGQSLASDSSLLSIGCNYLKYVKNGGLEMIDQFISRQPIHFEK
NAIKMLDKWATSVETKNSIYKMLSLQDFKRKRYAASLNWLMLANDNSHITLLSNYLLENQ
LNSEFLNDLQSLLEKNDEIDCNINNNNNNNNNNNSNNRISGNNNNNMIIDENKFEITNNS
ELIFLIRYRELISLWKERSFKEYSSSLCLMFKDRVIPKRFWLRLLIDCVPLLESLKNLYF
TYQDTLLLQSCLEEIIQSHLFDQYSFNISNQDIQILRSALARNLAKSIIS
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgttttcattaaatccacaatcaaatggaaatagtaataatttatttgggaatgtaacc
cttggaaattttagtaataatagtaataatttatttggtggtagttcaacaacatcaaca
aataccaacaatagtaataatttatttggtggtagttcaacaaccaatagtaataattta
ttcggtagtggtggtagttcaacaaccaataacaacaacttcaatagcaacttcaacaat
aacaatataaagaatgaaaataaaattaaaaatggaaagaaattttataattttagatgg
tcaccaaccggagaaatcctattatataatacacttaataattttgataatcataatttt
gatcaaaaaaatggtggtagtgataccatacgttatgaaatgaatacaactttatcaaca
attaaaaaattttacaatgatttatatacaaattttgaaactatgcaaagaattgcaggt
ctttcaaatcaagttataccagatgatagagttagagagatttcacatcatagtagaaca
tatctatctgtgattttagcagcaatcaatcaaatgagtaaatctcaaaaaacaggttca
tacattgacgatgaagattcttgtatgaattgtgatcctttagataatgatttaattaaa
atacaaacaccaagagtattagaatattttaaacaatatccaaataaaacattaattttc
ttttgtggtagtatcgattcaatttatccatatctttgttcaaaattatcaatggagaca
aaatcaaaatgtatattaatagcaagagaatcaaatgttccaaattcaaaacgtttagat
ttaattagaacaatttcaaatcaaggtgaacttaaaattttaaataaagatgaatattca
aatagatatcaaattgcaaatgaaaattatggtgaattagatgatgttttaacattagag
attgatgatacttatttagcatatgaaagagagatagataatttaatttgtatgtcaaca
atgtggagagttgcaaatttattttattttagtgtttcaagttcatcaaattcagtatca
ccaactcaattattggattgtatagaattggagagaaaagaactattgaatagcatcgaa
caacaaggtacacaagatccaatggattcggaatattacaatcaaattgcacgtctattg
gtttgtggttgtatagatcaagtcattcaacaattgaatatactaagtcgtgcaccaaga
agtgcatcacaaattaaatcaacctctagaaaatcaccaatcaatctattgattgatatt
ctctcttcaataccattgaaaaagaaatcaatcaatggtggtggtggtgcaccactctat
ccaaatgaacatttaattcaatggaataaatggcatcaagaaactcagaaaatactctct
caatatattgaaagtggtagttcaagtaccaatcaagtcgatgagaaccttttaccaata
gtaaagatccttttaggtgatcaacaaactataatgtcaacttgtaatagttttcttcaa
ttggtagtttcaaatattctctttgttgagtatacaacctcaaccactcaattacgtcaa
cttttcactcaatgttatcaaactattcaagctccaacaactgttgataaaattttctta
tcatttgcaacaaaggatttagatattacattaaagaaaatttttaaacattcaccagca
tggttagcagtacatttatcagatttattatatcatcatccatatgttatgagaaaatta
ccaaattcagaatcacaattaacaaatattagagaatatttattatcagattttggtcaa
tcattagcatcagattcatcgttattatcaattggttgtaattatttaaagtatgtaaag
aatggtggtttggaaatgattgatcaattcatatcaagacaaccaattcattttgaaaag
aatgcaattaaaatgttggataaatgggctacctctgttgaaacaaagaattcaatctat
aaaatgttatcacttcaagatttcaaaagaaaaagatatgctgcaagtttaaattggtta
atgttggcaaatgataattcacatatcactttattatcaaattatttattagagaatcaa
ttaaattcagaatttttaaatgatctacaatcattattagaaaaaaatgatgaaattgat
tgtaatataaataataataataataataataataataataatagtaataatagaataagt
ggaaataataataataatatgataattgatgaaaataaatttgaaattacaaataatagt
gaattaatatttttaattagatatagagaattaattagtttatggaaagaaagatcattt
aaagagtattcaagttcactttgtttgatgttcaaagatagagttatcccaaaacgtttt
tggttacgtttactcattgattgtgttccattattagaaagtttaaaaaatctttatttc
acttatcaagatacacttcttttgcaatcttgtttagaagaaatcattcaatcccattta
ttcgatcaatactcttttaatatttcaaatcaagatattcaaattttacgtagtgcttta
gctagaaatttagcaaagtcaatcatatcctaa
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