Dictyostelium discoideum (cellular slime mold): DDB_G0285901
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Entry
DDB_G0285901 CDS
T00245
Name
(RefSeq) Vps53-like domain-containing protein
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ddi04131
]
DDB_G0285901
Membrane trafficking [BR:
ddi04131
]
Protein recycling
Others
EARP complex
DDB_G0285901
Endosome - Golgi transport
Tethering complex
GARP complex
DDB_G0285901
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
Vps54_N
VPS53_C
COG5_N
XhlA
COG4_N
EXOC6_Sec15_N
CDC45
Motif
Other DBs
NCBI-GeneID:
8625345
NCBI-ProteinID:
XP_637994
dictyBase:
DDB_G0285901
UniProt:
Q54MJ6
LinkDB
All DBs
Position
4:3805604..3808315
Genome browser
AA seq
838 aa
AA seq
DB search
MSALPSIDGSVTEWTNDMFSPELQAAIRDIVPVTDRDFDKHDFNPVAYINDNFSNEQSLT
RLDNFMNRLKLKIIKIDEEIIQEVRLQSISGGKGKEDLENAKRSINELLTKITDIKSKAN
QSEQMVTEICKDIKSLDYAKKNLTTAITTLKRLHMMVMGVEQLKEMVDKKQYGTVAKLLE
ATAQFAEGFKDYRESPKIYALNKELDNIRSRVKDQIYEDFNQYVPYTSNQIKPNEENRWK
SSCYVIDALGSEVKKDFLRWFCGSQLSSYKKAFGSQSESYTLDSTDRRFGWWSRQIKIFR
EEYALVFPPEWCMEEQISYEFCILTRLDLSEVLLINKNSIEVPQLIKALKKTLTFENKLY
ELFAQNNQKLSSPTMSSTPSNESENNSDDSDQDDSDDDNGENQVDGENNSNNNNKGNSED
AIRRRWEARVEKDRKREEEKLQQQQLQQQQQQGKDVNKQQQQQQQPIEIPKSYERFKGII
SSSFDPYMDLYINEEDKLIGEVLEKVMAEEKWTLSDEEANKILTSCTDLVFHFIKVRNRC
AELTKGEPFFNLYHLFRKYLTQYANIISGKIHTDVGRAHDVQEDKTICLIINTAEFCRKT
SGQMTDGFKKIIDEKYKESIDLKDIQNDFSSIIAKGVKALVSGIEAKLDPHLQSMTRMEW
GERYQYVGDNSPYVNEVVQIISDSSQLEVAWLSPEHFRYFCDLFASSFGLRIPQSIYKCR
GISEIGSQGILLDITTIKTVLLDLPNKVKDGRSNSRYTKLLNKEFAKAENLLKVIGCSQD
HLVETFKDLFPDSTNADFQKIMDLKGFKVGDKIQTELFEKLSKVSTNIGASIKTKFFN
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcattaccatcaattgatggaagtgttacggaatggacaaatgatatgttttca
ccagagttacaagcagcaattagagatattgtaccagtgacagatagagatttcgataaa
catgattttaatccagtagcatatattaatgataatttctcaaatgaacaatcattaaca
agattagataattttatgaatagattaaaattaaaaattataaaaatcgatgaagagatc
attcaagaagttagattacaaagtattagtggtggtaaaggtaaagaagatttagagaat
gctaaaagatcaattaatgaattgttaactaaaatcactgatattaaatcaaaagcaaat
caatctgaacaaatggtaactgaaatttgtaaagatattaaatctttagattatgctaaa
aaaaatttaacaactgcaattacaactttaaaaagattacatatgatggttatgggtgtt
gaacaattaaaagagatggttgataaaaaacaatatggtacagttgcaaaattattagaa
gcaacagcacaatttgcagaaggatttaaagattatagagaatcaccaaaaatttatgca
ttaaataaagaattggataatattagatcaagagttaaagatcaaatttatgaggatttc
aatcagtatgtaccatatacgagtaatcaaattaaaccaaatgaagagaatagatggaaa
agttcatgttatgttatcgatgcattaggtagtgaagttaaaaaggattttttaagatgg
ttttgtggttcacaattatcgagttataagaaagcatttggtagtcaatcagagagttat
acattggatagtacagatagaagatttggttggtggtcaagacaaattaaaatatttcgt
gaagagtacgctttagtattcccaccagaatggtgtatggaagaacaaatcagttatgag
ttttgtattctcactcgtttagatctatcagaggttttattaattaataaaaattcaatt
gaagtaccacaattaattaaagcattaaagaaaactttaacttttgaaaataaactttat
gaattatttgctcaaaataatcaaaaattatcatcaccaactatgtcatcaacaccaagt
aatgaaagtgaaaataattcagatgattcagatcaagatgattcagatgatgataatggt
gaaaatcaagttgatggtgaaaataatagtaataataataataaaggtaatagtgaggat
gcaattagaaggagatgggaagctagagttgaaaaggatagaaaaagagaagaagagaaa
ttacaacaacaacaattacaacaacagcaacaacaaggtaaagacgttaataaacaacaa
caacaacaacaacaaccaattgaaataccaaaatcctatgaaagatttaaaggaattata
tcatcatcctttgatccatatatggatttgtatataaatgaagaggataaattaattggt
gaagtattggagaaagttatggcagaagagaaatggacattatcagatgaggaagccaat
aagatcttaacaagttgtacagatttagtattccatttcataaaggttagaaatcgttgt
gctgaactcacaaagggtgagccattctttaacctttatcatctatttagaaagtattta
acccaatatgccaatataatctctggcaaaattcatacagacgttggtagagcacatgat
gttcaagaggataaaactatttgtctcattattaataccgccgaattttgtagaaaaaca
tctggtcaaatgactgatggtttcaagaagattatcgatgaaaagtataaagagtcaatc
gatttaaaagatattcaaaacgacttctcaagtatcattgcaaagggtgttaaagcattg
gtaagtggtatcgaagctaaactcgacccacatctccaatcgatgactcgtatggaatgg
ggcgaacgttatcaatacgttggtgataattcaccatatgtcaatgaagtagttcaaatt
atttcagattcatctcaattagaagtggcttggttgtcacctgaacattttagatacttt
tgcgatttgtttgcttcttcatttggtttacgtattcctcaatcaatctataaatgtcgt
ggtatctctgaaattggttcacaaggtatcctattggatattactaccattaaaactgta
ctattagatttaccaaataaagttaaagatggccgtagcaatagtcgttacacaaaatta
ttgaataaagaatttgcaaaggctgaaaatctactcaaagttattggttgctctcaagat
catctcgttgaaacatttaaagatttattcccagattctacaaatgcagatttccaaaaa
attatggatcttaaaggttttaaagttggtgataaaattcaaactgaattatttgaaaaa
ttatcaaaagtttcaacaaatattggtgcttcaattaaaactaaattttttaattaa
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