Dictyostelium discoideum (cellular slime mold): DDB_G0287021
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Entry
DDB_G0287021 CDS
T00245
Symbol
vps20
Name
(RefSeq) SNF7 family protein
KO
K12195
charged multivesicular body protein 6
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Pathway
ddi03250
Viral life cycle - HIV-1
ddi04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
DDB_G0287021 (vps20)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
DDB_G0287021 (vps20)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ddi04131
]
DDB_G0287021 (vps20)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ddi04147
]
DDB_G0287021 (vps20)
Membrane trafficking [BR:
ddi04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
DDB_G0287021 (vps20)
Exosome [BR:
ddi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
DDB_G0287021 (vps20)
Exosomal proteins of other body fluids (saliva and urine)
DDB_G0287021 (vps20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Snf7
Motif
Other DBs
NCBI-GeneID:
8625906
NCBI-ProteinID:
XP_637438
dictyBase:
DDB_G0287021
UniProt:
Q54KZ4
LinkDB
All DBs
Position
4:complement(5200451..5202252)
Genome browser
AA seq
343 aa
AA seq
DB search
MGILFSHCSGGREKEDKISKTDRAVLNLKIQRDKLKNYQTQVLEIAIAKECSKAGKKNQA
LLALKKKKYQEKMLDESFANLQNIEELIANVEQAEIQVRIFESLKQGNESLKEIQKEMSL
EDVENLMEETAEAIQYQNDISEALSGKFSKEEEDDLLNELDEMEKQLNAQQYPKVPETQL
PKIELPIEDAIEEGKQMVLNRENSSNSNNNSSGSGGSSGLKVIIISCNHEKTIGDINEFG
GSISGIGESGDSINSIGKSSDSISSDANDLSHSINIIVESGDSISRDANDLSDSTNSIGK
SSDSIGSDNNNYTDSINSIGELSDSISGDITEYSGSISVDIID
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgggaatacttttttcacattgcagtggcggaagagaaaaagaggataaaattagtaaa
actgatagagcagtacttaatttaaaaattcaaagagataaattaaagaattatcaaact
caggtattagagatagcaatagctaaagaatgttctaaagcgggtaaaaagaatcaagca
ttattagcattaaagaaaaagaaatatcaagagaaaatgttagatgaatcatttgcaaat
ttacaaaatatagaagaacttatagcaaatgtagaacaagcagaaatacaggttagaatc
tttgaatctttgaaacaaggtaatgaatcactcaaagagattcaaaaggaaatgtcatta
gaggatgtagagaacttaatggaagaaacagctgaagcaattcaataccaaaatgatata
tctgaagcattaagtggtaaattcagtaaagaagaggaagatgatttattaaatgaattg
gatgaaatggaaaaacaattaaacgcacaacaatatccaaaagtaccagagacacaatta
ccaaagattgaattaccaattgaagatgctatcgaagaaggtaaacaaatggtattgaat
agagaaaatagtagtaatagtaataataatagtagtggtagtggtggaagtagtggttta
aaagttatcataatatcatgtaatcatgagaagactattggtgatatcaatgaatttggt
ggttcaattagcggtattggtgaatcaggtgattcaattaatagtattggtaaatcaagt
gattcaattagtagtgacgccaatgacctcagtcattcaattaatattattgttgaatcc
ggtgattcgataagtagagacgctaatgacctcagtgattcaactaatagtattggtaaa
tccagtgattcaattggtagtgacaacaataattatactgattcgattaatagcattggt
gaattaagcgattcaattagtggtgatatcactgaatacagtggctcaattagtgttgac
atcattgactag
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