Dictyostelium discoideum (cellular slime mold): DDB_G0287337
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Entry
DDB_G0287337 CDS
T00245
Symbol
taf5
Name
(RefSeq) TFIID subunit
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Pathway
ddi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
DDB_G0287337 (taf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ddi03021
]
DDB_G0287337 (taf5)
03036 Chromosome and associated proteins [BR:
ddi03036
]
DDB_G0287337 (taf5)
Transcription machinery [BR:
ddi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
DDB_G0287337 (taf5)
Coactivators
SAGA/TFTC/STAGA complex
DDB_G0287337 (taf5)
Chromosome and associated proteins [BR:
ddi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
DDB_G0287337 (taf5)
STAGA complex
DDB_G0287337 (taf5)
TFTC complex
DDB_G0287337 (taf5)
SAGA complex
DDB_G0287337 (taf5)
SLIK complex
DDB_G0287337 (taf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
TFIID_NTD2
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_EML
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
RMC1_N
Beta-prop_DCAF4
Beta-prop_HPS5
Ge1_WD40
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
eIF2A
Beta-prop_DCAF12
WD_LRWD1
VPS8_N
LisH
ELYS-bb
WDR54
Motif
Other DBs
NCBI-GeneID:
8626077
NCBI-ProteinID:
XP_637246
dictyBase:
DDB_G0287337
UniProt:
Q54KH7
LinkDB
All DBs
Position
5:150447..153588
Genome browser
AA seq
948 aa
AA seq
DB search
MSTPPQQPNQSQPTQSPPIITTPQTTTTTISSPIAQTTIPASGVGSSSANAVTSTPSPTT
TTSTAPSTPTPTPTPTPNPNTTSSISTSTPTPTTTTTTILTPPLPQNTTTPITAVPSSAS
AIPITATTTISPNTSSNITALPTTPTTPNITPTTTAATTTTTTTPTTSSSSSTTNAPTSN
EVKSAQTKDKYDLAVLNYLRKKGYTNAEAILKQEIFNSSQSMSSPISPSDDEATNTTTTN
QTNINTVTDNLGSSDDQELAQYLHMYNSSNKGDTSNPQNYLEQYKKLGNWIHSSLDIYKN
ELLSILYPVFVHSYIDLITKGYPQQARELMEKIGPDHEEYFGDDLKLLRGISNTDHLKEN
ELVDLFRNNRWNIKMCAYSFELLMSFLHQSNFILLLGLINQYIHINVSNLRPGFIDDEQY
SISFQSEKDAGDLNSTPINYHAFKPEFEDDVLVQQKEKQQLEQGRILPLTDPNAPLPPVV
APPPPPPPTSGYIPKLKKKDKKKKEVKDERMSKIESNVPIPNLTERFENELMEDFTKCVS
LSSSHLPSICFYTIFNTYQGLNTTDISKDAQLVAGGFSDSSVKIWNLKEMKEQRLQQQQQ
QQQQQQQQQNSNQNGYFENGNFASSASSASSAMNGSGNNNENNKSTTANNNLNSGSSSSS
NKLQKQQKESEFKTFLGHSGPVYGCSFSPDSQYLLSCSEDTTARLWSMETMSNLVCYKGH
NFPVWDVSFSPFGFYFATASHDRTARLWTTNHISPLRIFTGHLSDCNTVRFHPNINYLAT
GSNDKSARLWEIQTGKCVRIFMGHRAPIYTVAFSPDGRLLATAGEDTSVILWDLSTGKKV
KKMDGHTKCVYSLDFSCDGSILASGSSDCTVRLWDVKKAFNSSLSTQPSSLINDESRKRK
TLKSKLFSDELLETYPTKQTPVYNVCFSRRNLLLASGAFNTLTAFDKF
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactccacctcaacaaccaaaccaatcacaaccaactcaatcaccaccaataata
acaacaccacaaacaactacaactacaatatcatcacctatagcacaaaccactatacct
gctagtggtgttggatcatcaagtgcaaatgcagtaacatcaactccatcaccaacaact
acaacttctacagcgccatctacaccaaccccaacaccaacaccaacaccaaacccaaat
acaacatcatcaatatcaacatcaactccaactccaactacaacaacaacaacaatttta
acaccaccacttcctcaaaatactacaacaccaattacagcagttccatcatcagcatca
gcaataccaattacagcaacaacaacaatatccccaaatacatcatcaaatataacagca
ttaccaacaacacctacaacaccaaacataacacctacaacaacagcagcaacaacaact
actacaacaacaccaacaacatcatcgtcatcatcaactacaaacgcgccaacatcaaat
gaagtaaaatcagcacaaacaaaagataaatatgatttagcggtacttaattatttaaga
aaaaaaggatacacaaatgcagaggcaatattaaaacaagaaatatttaattcaagtcaa
tcaatgtcatcaccaatatcaccatcagacgatgaagcaaccaataccaccactaccaat
caaaccaatattaatacagttacagataatttaggatcatcagatgatcaagaattagca
caatatcttcatatgtataatagtagcaataaaggtgatacatctaatcctcaaaactat
ttagaacaatataaaaaacttggtaattggattcacagttctttagatatctataagaat
gaattactctcaatcttatatccagtatttgttcattcatatatcgatttaatcacaaaa
ggttatccacaacaagctagagaattaatggaaaaaattggtcctgatcatgaagaatat
tttggtgatgatttaaaattattaagaggtattagtaatactgatcatttaaaagaaaat
gaattagttgatttatttagaaataatagatggaatattaaaatgtgtgcatattcattt
gaattgttaatgtcatttttacatcaaagtaatttcatattattattaggattaattaat
caatatattcatatcaatgtaagtaatcttagacctggtttcattgatgatgaacaatat
tcaatatcatttcaatcagagaaagatgctggtgatttaaattcaacaccaatcaattat
catgcatttaaaccagaatttgaggatgacgtattagtacaacaaaaagagaaacaacaa
ttggaacaaggtagaatcttaccattaactgatccaaatgcaccattaccacctgttgtt
gctccaccaccacctccaccaccaacttctggttatattccaaaattaaagaaaaaagat
aaaaaaaaaaaagaagttaaagacgaaagaatgtcaaaaattgaatcaaatgtaccaatt
ccaaatttaactgaaagatttgaaaatgaattaatggaagattttacaaaatgtgtttca
ttatcatctagtcatttaccatcaatttgtttttatacaatttttaatacttatcaagga
ttaaatacaacagatatttcaaaggatgcacaattagttgcaggtggttttagtgatagt
tctgtaaagatttggaatttaaaagaaatgaaagaacaaagattacaacagcaacagcaa
caacaacaacaacagcaacaacaacaaaattcaaatcaaaatggttattttgaaaatggt
aattttgcatcatcagcatcatcagcatcatcagcaatgaatggtagtggtaataataat
gaaaataataaatcaacaactgcaaataataatttaaatagtggtagtagtagtagtagt
aacaaattacaaaaacaacaaaaagaatcagaatttaaaacatttttaggtcattctgga
ccagtttatggttgttcattctcaccagattcacaatatttattatcatgttcagaggat
acaacagcaagattatggagtatggaaacaatgagtaatttagtttgttataaaggtcat
aatttcccagtttgggatgtatcttttagtccatttggtttctatttcgcaacagcatct
catgatcgtactgcaagattatggacaaccaatcatatatcaccattacgtattttcact
ggtcacctttcagattgtaatacagtacgttttcatccaaatatcaattacttagccact
ggtagcaatgataaatctgcacgtctttgggagattcaaaccggtaaatgtgtgcgtatt
ttcatgggtcatcgtgccccaatttacactgttgccttctcgccagatggtagattatta
gcaaccgctggtgaggatacaagtgttatcctttgggatttatcgacaggtaaaaaggtt
aaaaaaatggatggtcatacaaaatgtgtttactctttggatttcagctgtgatggtagt
atacttgctagtggttcctctgattgtacagtacgtttatgggatgttaaaaaagctttc
aatagttccctctcaactcaaccatcatcattaattaatgatgaatctagaaaaagaaaa
acacttaaatcaaaattattctctgatgaacttttggaaacttatccaacaaaacaaact
ccagtttataatgtttgtttctcaagaagaaacttattattagcttctggtgcttttaat
actttaactgcttttgataaattttaa
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