Dictyostelium discoideum (cellular slime mold): DDB_G0287393
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Entry
DDB_G0287393 CDS
T00245
Symbol
mlh1
Name
(RefSeq) MutL DNA mismatch repair protein
KO
K08734
DNA mismatch repair protein MLH1
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Pathway
ddi03430
Mismatch repair
ddi03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
DDB_G0287393 (mlh1)
03460 Fanconi anemia pathway
DDB_G0287393 (mlh1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ddi03400
]
DDB_G0287393 (mlh1)
DNA repair and recombination proteins [BR:
ddi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
DDB_G0287393 (mlh1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
New_glue
Motif
Other DBs
NCBI-GeneID:
8626116
NCBI-ProteinID:
XP_637285
dictyBase:
DDB_G0287393
UniProt:
Q54KD8
LinkDB
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Position
5:complement(247623..250277)
Genome browser
AA seq
884 aa
AA seq
DB search
MDFLKSLPPLQTTDSNSTTAAVNTTTTTATNTATTTATNTATTTTTTTTTNLNNLINESK
KKIHRLTQEVVNKISAGEVIQRPSNALKELLENCLDAKSTTITVTVKDGGMKFLQIQDNG
SGIRLEDMGIVCERFTTSKLTKFEDLRSIQSFGFRGEALSSISHVSHLKILTKTADSPCA
YRACYLNGKLTPPSPNEQSSDPKPCAGVNGTQITVEDLFFNTPSRKNVLKNTVDEHSRIV
LLMKKYAINNPTVSFILKKQGDPTPEVHTSGGQNSLEKDVIGSLYGTDLSKELKIITIDP
NNPNPNNDDDDNISGSQIKNSNLNRLDFTMKGFFSSTNYNSKKINFILFINGRLVDSKNL
KTGLEQVYSKYLPKGTHPFMFIRLLVPPKNIDVNIHPTKSEVKILHEEQIIEFIQQKVDQ
ELSISSNSKTFSTQILLPGFDQDNVSSSQKKQKNSQSSSTQTKSTNNNNNPTSRKEPIEY
AKDKIRSDSKSQTLDAFLNPMDYNNNNDSSIDDNDGSGIGRYDDVDGSAGAAGAGGKFND
NLIFNDNSENEAPRDIDNPLSSVTPIKSKEQRQQQSTTTTTTTTTTTATTKSNSPASKND
IKKLQEHTFITPRKTRKYKQVELTSIKTLISEFQSNVHDGLKEFFNDCVFVGCLDHSYAL
VQFGKKLYLINLENITKELFYQLSLLRFSDFDSIKFSQSLSIYSLLLVSLDSPLSGWMES
DGPKDKIADYLTKLLISKKELLNEYFSIEINEDGELVGIPQVLDHYVPCTDNLPIFLLKL
ATEVEWEFEKECFAGIVKEISSFFKIEPSFLKLRDTQVNNQQQTNSTTTTNNINFIKKDG
KEWIIQHLIFPAFRKLSPPKKFANDGSVIQITTLDNLYKVFERC
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atggattttcttaaatcgctaccacctttacaaacaacagatagtaattcgacaacagca
gcagtaaatacaacaacaacaacagcgacaaatacagcaacaacaacagcgacaaataca
gcaacaacaacaacaacaacaacaacaacaaatttaaataatttaataaatgaaagtaaa
aaaaagattcatagattaactcaagaagttgtaaataaaatatcagcaggtgaagttata
caaagaccaagtaatgcattaaaagaattattagagaattgtttagatgcaaaatcaaca
actattacagttacagttaaagatggtggtatgaaattcttacaaattcaagacaatggt
tctggtattagattggaggatatgggcattgtttgtgaacgtttcaccacaagtaaatta
actaaatttgaagatctaagaagtattcaatcatttggatttcgtggtgaagcattatca
agtataagtcacgtttctcacttgaaaattctaactaaaaccgctgattcaccatgtgcc
tatcgtgcatgttatcttaatggtaaattaacaccaccttcaccaaatgaacaatcatca
gatccaaaaccatgtgccggtgtaaatggtacccaaatcactgttgaagatttatttttc
aatacaccctctcgtaagaatgtcttaaagaatacagtcgatgaacattcaagaatcgtt
ttattaatgaaaaaatatgcaatcaataatccaacagtatcttttatcctaaagaaacaa
ggcgacccaactcctgaggttcatacaagtggtggtcaaaattctttagaaaaagatgtt
ataggttcattatatggtactgatttaagtaaagaattaaaaattattacaattgatcca
aataatcccaatcctaataacgatgatgatgataatattagtggtagtcaaattaaaaat
tcaaatttaaatagattagattttacaatgaaaggctttttttcaagtacaaattataat
tcaaagaaaattaattttattctatttattaatggtagattggttgattcaaaaaattta
aaaactggtctagaacaagtttatagtaaatatctaccaaaaggaactcatccattcatg
tttattaggctattagtaccaccaaagaatattgatgttaatattcatccaacaaagagt
gaagttaaaattttacatgaagaacaaatcattgaattcattcaacaaaaagttgatcaa
gaattaagtatctcttcaaattcaaaaactttttcaactcaaattttattacctggtttt
gatcaagataacgtttcatcatcacaaaagaaacaaaaaaattcacaatcctcttcaact
caaacgaaatcaaccaataataataacaatccaactagtagaaaagaaccaattgaatat
gcaaaagataaaattagatcagattcgaaaagtcaaactttagatgcatttttaaatcca
atggattataataataataatgatagtagtattgatgataatgatggtagtggaattggc
agatatgatgatgttgatggtagtgctggagctgctggtgctggtggtaaatttaatgat
aatttaatttttaatgataatagtgaaaatgaagcaccacgtgatattgataatccttta
tcaagtgttacaccaattaaatcaaaagaacaacgacaacaacaatctacaactacaact
acaactacaacaacaacaactgcaacaacaaaatcaaatagtccagcatcaaagaatgat
attaaaaaattacaagaacatacatttataacaccaagaaaaactagaaagtataaacaa
gttgaattaacaagtataaaaactttgatctcagaatttcaatcaaatgttcatgatggg
ttaaaagaatttttcaatgattgtgtttttgttggttgtttagatcattcctatgcattg
gtacaatttggaaagaaactttatttaatcaatttagagaatataacaaaggaacttttt
tatcaattatcattacttagattctctgatttcgatagtattaaatttagtcaatcatta
tcaatttattcattgttattggtttcattagattcaccattatcaggttggatggaatct
gatggtccaaaagataagattgcagactatctaaccaaattgttaatctcaaaaaaagaa
ttactaaatgaatatttctcaattgaaattaatgaagatggtgaacttgttggtattcct
caagtacttgatcattatgtaccttgtactgataacttaccaatctttttattaaaattg
gctaccgaagttgaatgggaatttgaaaaagaatgttttgctggtatagttaaagaaatc
tcttcctttttcaaaattgaaccttcttttttaaaattacgtgacactcaagtaaataat
caacaacaaacaaattctaccaccacaacaaataatataaatttcattaaaaaagatggt
aaagaatggattattcaacatttaatttttccagcttttagaaaattatcaccaccaaag
aaatttgcaaatgatggatctgtaatacaaattacaactcttgataatttatataaagtt
tttgaaagatgttaa
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