Dictyostelium discoideum (cellular slime mold): DDB_G0287661
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Entry
DDB_G0287661 CDS
T00245
Symbol
spt5
Name
(RefSeq) transcription initiation factor Spt5
KO
K15172
transcription elongation factor SPT5
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Pathway
ddi03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
DDB_G0287661 (spt5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ddi03021
]
DDB_G0287661 (spt5)
03019 Messenger RNA biogenesis [BR:
ddi03019
]
DDB_G0287661 (spt5)
Transcription machinery [BR:
ddi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
DDB_G0287661 (spt5)
RNA polymerase I system
DDB_G0287661 (spt5)
Messenger RNA biogenesis [BR:
ddi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
DDB_G0287661 (spt5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KOW4_SPT5
KOW
KOWx_SPT5
Spt5-NGN
KOW5_SPT5
KOW1_SPT5
KOW2_Spt5
KOW7_SPT5
GPKOW_C
Motif
Other DBs
NCBI-GeneID:
8626217
NCBI-ProteinID:
XP_637122
dictyBase:
DDB_G0287661
UniProt:
Q54K42
LinkDB
All DBs
Position
5:complement(473577..477073)
Genome browser
AA seq
1131 aa
AA seq
DB search
MAHSDDENYDEEEENFDDEEEEYDDSEEDEESSRRSSKKSKNDFFEEEAEADDAEDDYEE
DEGEAEDGFEQLSSEQMKKDREAYSSLRERDNGLSNILQKVQKYADNEDYGYDDDEGDYD
EDLPKQSYWRLKCRVGEEKLFVASMMQKMLNNRNSNNPNDHVLIKSVMAPHHLSGYVYVE
AEREVHVRQAIKGMTSLVSFTPVITPLKDIIEVISANKKNVDLQKGGWVRIRLGKYKADI
GQIISYDPSKSRVTVKLIPRLDLPSIAQSLQEKENKANNNNKNKNNNNNNPNNNSPNNNN
PNNPNNNNPNNNNPNDNNKNNNNNKNNNNNNPNNNNKNNNNNNNKNNPNNNNPNNNNNPN
NNNINNNNINNNNKNNINNSGGGGGGGGGSSGTGGSNGIDKAVATPKRKRTRPQARFFNP
DEVEKMKIPLNQSTTLSGLFYILNGDKYKDGFLHKVFRVASVNIDGVVPSLEELQKFQDR
GEVQMDEEGQPIENISAEISSVPILPRLQTKSTHFAKGDTVKVIQGDLKNLMAIVESVEE
DRVLILPIDEQIKDLFAFKPYELQKYFKVGDHVKAIGGRYEGETGMVLRVDDLQVVLLSD
LTMSEIKVKPQDLQECTEVATGRLELGNYELHDLVQIGPHKVGVIIKVERDSFKVLDESS
NVSTVKLQEVGNKRRNKSFTTLDAHHNTITSGDLIEVVDGAYKGKQGTILHISRNFLFIK
SKDIFENGGVFVVRTQYCSLLGGNKNKQSNIQQQQQQQQQQQQQQHSSQGGRGGGRGGYN
NSGRGRGGRGREDSPLHKVVTIKKGSWKGYVGIVKECTDTMVQVELQTNSKKINVLKTDI
ALPNERQQMQQQQTNDWDQLYNASRTPMREDPSQTPMRMNTPARSSHSDPWSMRESSDYF
SSSSSSGSGSGSSSNNNSSSGGGRDSGSHNGNDYSSGTTPGTNYSLYSPYTPNTPLDGSN
RSDPNYTPYDRSTPSMGYGNDPNPTPSYMSNYTPHEIPSSPYTPHNPQTPATPNSSEDHD
EEVEPQYWSGTKIEVVFKDSGKHAVVLDNLSDSTVRVEMLDTKEVIDNVSQSQLNLVPPA
KKDRVVIVKGKLCGQSGNLFILTDENTGIVKMNSNFDFKVFKMSYIGKLIR
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atggcacattcagatgatgaaaattatgatgaagaagaagaaaattttgatgatgaagaa
gaagaatatgatgatagtgaagaagatgaagagtcatcaaggagaagttccaagaaatca
aagaatgatttttttgaagaagaagcagaagcagatgatgcagaggatgattatgaagag
gatgaaggtgaagccgaagatggtttcgaacaacttagtagtgaacaaatgaaaaaagat
agagaagcctatagttcattaagggaaagagataatggattaagtaatatacttcaaaag
gtacaaaagtatgcagacaatgaagattatggatatgatgatgatgaaggcgattatgat
gaggatttaccaaaacaaagttattggcgtttgaaatgccgtgttggtgaagagaaacta
ttcgttgcatcaatgatgcaaaagatgttaaacaatagaaacagcaataatccaaacgat
catgtactcattaaatcggttatggcaccacatcatctatcgggttacgtttatgtagag
gcagaaagagaggttcacgttagacaggccattaaaggtatgacatcattggtttcattc
acaccagtcatcacaccactcaaagatatcatagaagtaatttctgccaacaaaaagaat
gtcgaccttcaaaagggtggttgggttcgtattagattaggaaaatataaggccgatatt
ggtcaaatcatctcttatgatccatcaaaatcacgtgtcacagttaaattgattccacgt
ttagatttaccatctatagcacaatcattacaagaaaaagaaaataaggcgaataataat
aataaaaataaaaataataataataataatccaaataataatagtccaaataataataat
ccaaataatccaaataataataatccaaataataataatccaaatgataataataagaat
aataataataataaaaataataataataataatccaaataataataataaaaataataat
aataacaataataaaaataatccaaataataataatccaaataataataataatccaaat
aataataatattaataataataatattaataataataataaaaataatattaataatagt
ggaggtggaggtggtggtggaggaggtagtagtggaactggcggtagtaatggaatagat
aaagctgttgcaacaccaaagagaaaaagaactcgtcctcaagctagatttttcaatccc
gatgaggtggagaaaatgaaaataccactcaatcaatcaactaccctaagtggtttattc
tatattctaaatggtgacaaatataaagatggtttccttcataaagtttttagagtagca
tcagtgaatatcgatggtgttgtaccatcattagaggagttacaaaagtttcaagataga
ggtgaagttcaaatggatgaagaaggtcaaccaattgaaaatatttcagcagaaatttcc
tctgttccaattttaccacgtcttcaaacaaaatcaactcattttgcaaaaggtgatact
gtaaaagttattcaaggtgatcttaaaaatttaatggcaattgtagagtctgttgaagaa
gatagagttttaattttaccaattgatgaacaaattaaggatttatttgcattcaaacca
tatgaactacaaaaatattttaaagttggtgatcatgttaaagcaattggaggtagatat
gaaggtgaaacaggtatggtgttaagagtagatgatttacaggtcgttttattatcagat
ttgacaatgtcagagattaaagttaaacctcaagatttacaagagtgtacagaagtagca
actggtcgtttagagttgggtaattatgaattacatgatttagttcaaattggaccacat
aaagtgggtgttattataaaagtggaaagagattcattcaaggttttggatgagagttca
aatgttagcacagttaaattacaagaggttggaaataagagaagaaataaatcattcaca
acattggatgcacatcataacacaatcacctctggtgatttaattgaagtggtggatgga
gcttacaaaggtaaacagggtacaattcttcacatatctagaaactttttattcataaaa
agtaaagatatatttgagaatggtggtgtatttgtagtaagaactcaatattgttcactt
ttgggtggtaataaaaataaacaatctaatatacaacaacaacaacaacaacagcagcag
cagcaacaacaacagcactcttcacaaggtggtagaggtggaggtagaggtggttataat
aattcaggtagaggtagaggtggtcgtggtagagaagattcaccacttcataaagtggtt
accattaagaaaggatcttggaaaggatatgttggtattgttaaagaatgtacagatacc
atggttcaagttgaacttcaaaccaattcaaaaaaaattaatgttttaaaaaccgatatc
gccttaccaaatgaacgtcaacaaatgcaacaacaacaaaccaatgattgggatcaactt
tacaatgccagtagaacaccaatgcgtgaagatccttctcaaactccaatgcgtatgaat
acacctgctcgttcaagtcattcagatccttggagtatgcgtgaatcatcggattacttt
tcatcaagtagtagtagtggtagtggtagcggtagtagtagtaataataatagtagtagt
ggtggtggtagagatagtggtagccataatggaaacgattatagcagtggtactacacca
ggtacaaattatagtttgtactcaccttacacaccaaataccccattggatggttccaat
agaagtgatccaaactatacaccatatgatcgttccactccttcaatgggttatggtaat
gatccaaatccaacaccatcctatatgtcaaattatacaccacatgaaattccttcatca
ccatacacaccacataatccacaaacacccgcaactccaaactcaagtgaagatcatgac
gaagaagttgaaccacaatattggtctggtacaaagattgaagtagtctttaaggattct
ggtaaacatgccgtagttttagataatctctctgattcaaccgttagagttgaaatgtta
gacaccaaagaagtaattgataatgtttcacaatctcaactcaatttggttccaccagct
aaaaaagatcgtgtcgtcattgttaaaggtaaattatgtggtcaaagtggtaatcttttc
attcttactgatgaaaatactggtatcgttaaaatgaattcaaactttgattttaaagtt
ttcaaaatgtcttatattggtaaactaataagataa
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